Rhizobium johnstonii: RL1832
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Entry
RL1832 CDS
T00402
Symbol
exoA
Name
(GenBank) putative exodeoxyribonuclease
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
rle
Rhizobium johnstonii
Pathway
rle03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rle00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
RL1832 (exoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rle03400
]
RL1832 (exoA)
Enzymes [BR:
rle01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
RL1832 (exoA)
DNA repair and recombination proteins [BR:
rle03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
RL1832 (exoA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
RuBisCO_small
Motif
Other DBs
NCBI-ProteinID:
CAK07327
UniProt:
Q1MI83
LinkDB
All DBs
Position
complement(1927114..1927908)
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AA seq
264 aa
AA seq
DB search
MKIATYNVNGINGRLDILSRWLKEDTPDVVCLQELKTDDARFPRKEIERAGYGAIWHGQR
SWNGVAILAKGKIPILTRRGLPGDPDDTHSRYIEGAVDGILVGCLYLPNGNPFPGAKFDY
KLRWFRRLHEYAAELLELEVPSILAGDFNVMPTEIDVYKPERWLDDALFRPEVRRAYADL
VAQGWTDAVRHLHPEERIYTFWKYWRNSFERDAGLRIDHFLLSPAVAPWLRSATVRKKPR
GWEHTSDHAPVMIELDVSKAGADL
NT seq
795 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatcgcaacctacaacgtcaacgggatcaatggacggttggacatcctgtcgcgc
tggctcaaggaggatacccctgatgtggtctgcctccaggaactgaagacagacgatgcc
aggtttccgcgaaaggagatcgaacgagccggctacggcgccatctggcacgggcagaga
tcctggaatggggttgcgatcctggcaaaaggcaagataccgatcctgacgcggcgcggt
cttcccggcgatcctgacgatactcacagccggtatatcgaaggcgccgtcgacggcatc
ctggtcggatgcctgtatcttcccaacggcaatccgttcccaggagcaaagttcgattac
aagcttcgttggtttcgtcgcctgcacgaatacgccgccgaactcctcgagctcgaggtg
ccttccatcctggccggcgacttcaacgtcatgccgacggagatcgacgtctacaagccg
gaacgctggctggacgacgccctcttcaggccggaagtgcgcagggcctatgctgatctc
gtcgctcagggctggaccgatgccgtcagacatctgcatccagaggagcgcatctatacc
ttctggaaatactggcggaacagcttcgaacgtgatgcagggcttcggatcgaccacttc
ctgctcagtccggcagtcgccccatggcttcgatcggcgaccgtccggaaaaaaccgcgc
ggctgggagcataccagcgaccacgcccccgtcatgatcgagctcgacgtttccaaagcc
ggagccgacctgtga
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