KEGG   Rhizobium johnstonii: RL1945
Entry
RL1945            CDS       T00402                                 
Name
(GenBank) putative vitamin B12-dependent ribonucleotide reductase
  KO
K00525  ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
Organism
rle  Rhizobium johnstonii
Pathway
rle00230  Purine metabolism
rle00240  Pyrimidine metabolism
rle01100  Metabolic pathways
rle01232  Nucleotide metabolism
Module
rle_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP
rle_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP
Brite
KEGG Orthology (KO) [BR:rle00001]
 09100 Metabolism
  09104 Nucleotide metabolism
   00230 Purine metabolism
    RL1945
   00240 Pyrimidine metabolism
    RL1945
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rle03400]
    RL1945
Enzymes [BR:rle01000]
 1. Oxidoreductases
  1.17  Acting on CH or CH2 groups
   1.17.4  With a disulfide as acceptor
    1.17.4.1  ribonucleoside-diphosphate reductase
     RL1945
DNA repair and recombination proteins [BR:rle03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   Modulation of nucleotide pools
    RL1945
SSDB
Motif
Pfam: Ribonuc_red_lgC Ribonuc_red_2_N TACO1_YebC_N Ribonuc_red_lgN GrpE
Other DBs
NCBI-ProteinID: CAK07438
RhizoBase: RL1945
UniProt: Q1MHX2
LinkDB
Position
complement(2049554..2053369)
AA seq 1271 aa
MRIERRFTKAGQGAYADIEFRKATSEIKNPDGSIVFRLENIDVPAQFSQVATDVLAQKYF
RKAGVPTRLKKVEENDVPSFLWRSVPDDAALKTLSKDEQTGSEIDARQVFDRLAGTWTYW
GWKGGYFSSEEDASAFKDELAYMLATQRVAPNSPQWFNTGLHWAYGIDGPGQGHFYVDPF
TGKLTKSKSAYEHPQPHACFIQSVEDDLVNEGGIMDLWVREARLFKYGSGTGSNFSMLRG
EGEKLSGGGRSSGLMSFLKIGDRAAGAIKSGGTTRRAAKMVVVDIDHPDIEEYINWKVKE
EQKVAALVTGSKVVAKHLKAIMKACFNCEGGDNGDCYDPNKNPALKREIRAAKKDQVPEN
YVQRVIQFARQGYKDLQFKTYDTDWDSEAYLTVSGQNSNNSVSIKDDFLRAVENDGEWNL
TARKDGRVMKTLKARDLWETISYAAWASADPGIHFNTTMNDWHTSPAGGPIRGSNPCSEY
MFLDDTACNLASLNLLQFKDKATKRINIADYEHAVRLWTVVLEVSVMMAQFPSKRIAELS
YEYRTLGLGYANIGGLLMSSGIPYDSTEARAIAGSLTAIMTGICYATSAEMAAELGPFPN
FAPNRESMLKVIRNHRRAAHGESSGYEALSINPVALIHSENPDQDLVAHAKSAWDKALEL
GEQHGYRNAQVSVIAPTGTIGLVMDCDTTGIEPDFALVKFKKLAGGGYFKIINRAVPDAL
RTLGYSESQIAEIEAYAVGHGNLNQAPAVNPSTLKTRGFTDEKVEAVNAALKSAFDIKFV
FNQWTLGADFLKETLKVSDEQLADMSFSLLDHIGFSKKDIEAANIHVCGAMTLEGAPFLK
NEHLPVFDCANPCGKIGKRYLSVESHIRMMAAAQPFISGAISKTINMPNEATVEDCKNAY
MLSWKLGLKANALYRDGSKLSQPLNSSLIEDEDDEDALEDLLQAPLAAQAVTITEKIIER
VVERVSREREKLPNRRQGYTQKAAVGGHKVYLRTGEFGDGRIGEIFIDMHKEGAAFRAMM
NNFAIAISLGLQYGVPLEEYVEAFTFTKFEPAGMVIGNDAIKNATSILDYVFRELAVSYL
GRHDLAHVDTSDFSNTALGKGIQEGKTNLLSTGWTRGYKPTLVSGTGGERQAGEPKGAAT
AAPARAASTGTVTAFAGAAARKLEPTIAVSTSEIVAFKRDYEERAKELAEEIAEEVTEEL
SSDATALFSDKAAADAATAKSEAKKREAERRQRSIMQGYTGNMCSECQNFTMVRNGTCEK
CDTCGATSGCS
NT seq 3816 nt   +upstreamnt  +downstreamnt
atgcgcatcgaacgtcgtttcacgaaggccggccaaggcgcctatgcggatatcgaattc
cgcaaggcgacgagcgagatcaagaaccctgacggttcgatcgtgttccgcctcgagaac
atcgacgttcccgcgcagttctcccaggtcgcgaccgacgttctggcgcagaagtatttc
cgcaaggccggcgttcccacccggctgaagaaggtcgaggaaaacgatgttccttccttc
ctgtggcgctccgttcccgacgatgctgcgctgaagaccctgtccaaggacgagcagacc
ggctccgaaatcgatgcgcgccaggtcttcgaccgtcttgccggcacctggacctattgg
ggttggaagggcggctatttctcctccgaggaagatgcatcggccttcaaggacgagctt
gcctatatgctcgccacccagcgcgtcgccccgaactcgccgcagtggttcaacaccggc
ctgcattgggcctacggcatcgatggtcccggccagggccatttctatgtcgatcccttc
accggcaagctgaccaagtccaagtcggcctacgaacatccgcagccgcatgcttgcttc
atccagtctgtcgaggacgatctcgtcaacgaaggcggcatcatggacctctgggtgcgt
gaagcgcgcctgttcaaatacggctccggcaccggctccaacttctcgatgctgcgcggc
gaaggcgaaaagctttccggcggcggccgctcctccggcctgatgagcttcctgaagatc
ggcgaccgcgccgcaggcgccatcaaatcgggcggcacgacgcgccgcgccgccaagatg
gtggtcgtcgacatcgaccatccggatatcgaggaatacatcaactggaaggtcaaggaa
gagcagaaggttgcggctctcgtgaccggctcgaaggtcgtcgccaagcatctgaaggcg
atcatgaaggcctgcttcaactgcgaaggcggcgacaacggcgattgctacgatcccaac
aagaaccctgccctgaagcgcgaaatccgcgccgccaagaaggaccaggttccggagaac
tacgtccagcgcgtcatccagttcgcccgccagggctacaaggatctccaattcaagacc
tacgacacggattgggattcggaagcctacctcacggtatccggccagaactccaacaat
tccgtctcgatcaaggacgacttcctgcgcgccgtcgaaaatgatggcgaatggaacctg
accgcccgcaaggacggccgggtgatgaagacgctcaaggcccgcgatctctgggaaacg
atttcctacgctgcctgggcttcggccgatccgggcatccatttcaacacgacgatgaac
gactggcacacttcgccggccggcggcccgatccgcggctcgaacccgtgctcggaatac
atgttcctcgacgatacggcctgcaaccttgcctcgctgaacctgctgcagttcaaggac
aaggccaccaagcgcatcaacatcgccgattacgaacatgcggttcgcctgtggaccgtc
gtgctcgaagtctcggtgatgatggcgcagttcccgtcgaagcgcatcgccgaactctcc
tacgaataccgcacgctcggccttggctacgccaatatcggcggcctgcttatgtcgtcg
ggcattccctatgactccacggaggcccgcgcgattgcagggtcgctgaccgcgatcatg
accggcatctgctatgcgacctcggccgaaatggccgccgagctcggcccgtttccgaat
ttcgcgccgaaccgcgagagcatgctcaaggtcattcgcaaccatcgccgtgcggcgcat
ggcgagagctccggctatgaagcgctgtcgatcaacccggtcgcgctgatccattcggaa
aacccggaccaggatctcgtcgcccacgccaaatcggcctgggacaaggcgctcgagctt
ggtgaacagcatggctaccgcaatgcccaggtctcggtcatcgcgcccaccggcacgatc
ggtttggtcatggattgcgacacgacgggcatcgagcccgacttcgccctcgtcaagttc
aagaagctcgccggcggcggctacttcaagatcatcaaccgcgccgtgcccgacgcgctg
cgcacactcggctattcggaaagccagatcgccgagatcgaggcctatgccgtcggccac
ggcaacctgaaccaggcgccggctgtcaatccgtcgacgctgaagaccaggggcttcacc
gacgagaaggtcgaagccgtcaacgccgcgctgaagagcgccttcgacatcaaattcgtc
ttcaaccagtggacgctcggcgccgacttcctgaaggagacgctgaaggtttccgacgaa
cagctcgccgacatgagcttcagcctgcttgaccatatcggcttctcgaagaaggacatc
gaagctgccaacatccacgtctgcggtgcgatgacgctggaaggcgcacccttcctgaag
aatgaacacctgccggtcttcgattgcgccaatccctgcggcaagatcggcaagcgctac
ctctccgtggaaagccatatccgcatgatggcggcggcccagccgttcatctcgggtgcg
atttccaagacgatcaacatgccgaacgaggcgaccgtcgaggattgcaagaacgcctac
atgctctcctggaagcttggcctcaaggccaacgcgctctatcgcgacggctcgaagctg
tcgcagccgctcaattcctcgctgatcgaggacgaggacgacgaggatgcgctggaggac
ctgctgcaggcgccgctcgccgcccaggcggtcaccatcaccgagaagatcatcgagcgg
gtggtcgagcgtgtttcccgcgaacgcgagaagctgccgaaccgccgccagggctatacc
cagaaggccgccgtcggcggacacaaggtctatctgcgcaccggcgaattcggcgacggc
cgcatcggcgagatcttcatcgacatgcacaaggaaggcgctgccttccgtgcgatgatg
aacaatttcgccatcgccatctcgctcggcctgcaatatggcgtgccgctcgaggaatat
gtcgaggccttcaccttcaccaagttcgagcccgccggcatggtcatcggcaatgacgcg
atcaagaacgccacctcgatcctcgactatgtcttccgcgagcttgccgtctcctatctc
ggccgccatgacctggcgcatgtcgatacctcggacttctcgaacaccgcgctcggcaag
ggcatccaggaaggcaagaccaacctgctctccaccggctggacccgcggctacaagccg
acactggtgtccggcaccggcggcgaacgccaggcgggcgaacccaagggtgcggccacc
gccgcccctgcccgcgccgcttccaccggcacagtgaccgcctttgccggcgccgctgcc
cgcaagctggaaccgacgattgccgtctccacctccgaaatcgtcgccttcaagcgcgat
tacgaggagcgcgccaaggaattggcggaagagatcgccgaagaggtgaccgaggaactc
tccagcgacgcaacggccctgttctccgacaaggcggcagccgacgcggccacggcgaaa
tccgaagccaagaagcgtgaagccgaacgtcgccagcgctcgatcatgcagggctatacc
ggcaacatgtgctcggagtgccagaacttcacgatggtgcggaatgggacctgcgagaag
tgcgacacgtgtggtgcgacgagcgggtgcagctga

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