Rhizobium johnstonii: RL1961
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Entry
RL1961 CDS
T00402
Symbol
cpdB
Name
(GenBank) putative 2',3'-cyclic-nucleotide 2'-phosphodiesterase
KO
K01119
2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:
3.1.4.16
3.1.3.6
]
Organism
rle
Rhizobium johnstonii
Pathway
rle00230
Purine metabolism
rle00240
Pyrimidine metabolism
rle01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rle00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
RL1961 (cpdB)
00240 Pyrimidine metabolism
RL1961 (cpdB)
Enzymes [BR:
rle01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.6 3'-nucleotidase
RL1961 (cpdB)
3.1.4 Phosphoric-diester hydrolases
3.1.4.16 2',3'-cyclic-nucleotide 2'-phosphodiesterase
RL1961 (cpdB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
5_nucleotid_C
Metallophos
PGA_cap
TAT_signal
Motif
Other DBs
NCBI-ProteinID:
CAK07454
UniProt:
Q1MHV6
LinkDB
All DBs
Position
complement(2067278..2069290)
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AA seq
670 aa
AA seq
DB search
MTPIRRISMSSIFDVGVMSRRSLLGGLAATSALVLLHPFSARASANQAHLRLMETTDIHV
NVFPYDYYADKPNDTMGLSRTGTIIDAIRAEAVNSLLIDNGDVLQGNPMGDYMAYQHGMK
DGDVHPVIKAMNTLGYTVGTLGNHEFNYGLDFMFKVLAGANFPFVCANLTKGQLASDPKQ
DDLFFKPYIIVEKQIKDGAGNESPVKIGFIGFVPPQIMLWDIKNLEGKAQTRDIVEAAKA
WVPAMKEAGADIVIALSHSGIDGSAPSEKMENASLHLAAVDGIDAIFTGHQHLVFPGPKS
WDGVSNADPVKGTLHGKPAVMAGFWGSHLGLIDLLLEKDGNSWKIVDFTSEARPIFHRDD
KKKVVADYADKKDVVEAAKAEHEATLAYVRTPVGKTSAPLYSYFALVADDPSVQVVSQAQ
TWYIKQMLADTEFKDLPVLSAAAPFKAGGRGGADYYTDVPAGDIAIKNVADLYLYPNTVQ
AVAITGAQVKNWLEMSAGMFNHIEAGSKDGALLNNDFPSYNFDVIDGVTYQIDLSQPPKY
DSSGKPIHPDANRIQNLAFNGKPIDPAQKFVVVSNNYRAGGGGNFPEITADKVIFQAPDT
NRDVIVRYIHDQGTINPSADANWTFKPLPGTTATFESGPKAKQFLAEVKSVKIEDAGEGA
DGFSKFRLVL
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atgacccctattaggagaatttccatgtcttccattttcgatgttggcgtgatgagccgc
cgttccctgctcggcggcctcgccgccacttccgccctggtgctgctgcaccctttcagc
gcgcgcgccagcgccaaccaggcccatctcaggctgatggaaacgaccgacattcacgtc
aacgtcttcccctatgactattatgccgacaagccgaacgacacgatgggcctgtcgcgc
accgggacgatcatcgacgcgatccgcgcggaggccgtcaactcgctgctgatcgacaat
ggcgacgtgctgcagggcaatccgatgggcgattacatggcctatcagcacggcatgaag
gacggcgacgtccatccggtgatcaaggcgatgaacacgctcggctatacggtcggcacg
ctcggcaatcacgagttcaactacggcctcgacttcatgttcaaggtcctggcaggcgcg
aacttccccttcgtctgcgccaacctgaccaagggccagctcgcctcggacccgaagcag
gacgatctcttcttcaagccctacatcatcgtcgaaaagcagatcaaggacggcgccggc
aatgagagccccgtcaagatcggcttcatcggcttcgtgccgccgcagatcatgctgtgg
gatatcaagaacctcgaaggcaaggcgcagacgcgcgacatcgtcgaggccgccaaggcc
tgggttcccgccatgaaggaagccggcgccgatatcgtcattgcgctctcgcattccggc
atcgacggcagcgcaccgtccgaaaagatggaaaacgcctcgctgcatctcgccgccgtc
gacgggatcgacgcgatcttcaccggccaccagcacctcgtcttccccggtccgaagagc
tgggacggtgtgtccaatgccgaccccgtcaagggcacgctgcacggcaagcccgccgtg
atggccggcttctggggctcacatctcggccttatcgacctgctgctcgaaaaggacggc
aatagctggaagatcgtcgatttcacctcggaggcacggccgatcttccatcgcgacgac
aagaagaaggtggttgccgactatgccgacaagaaggacgtggtcgaggccgccaaggcc
gagcacgaggcaacgcttgcctatgtccgcaccccggtcggcaagacctccgcaccgctc
tactcctatttcgcgctggttgccgatgacccctcggtgcaggtcgtcagccaagcccag
acctggtacatcaagcagatgctcgccgacaccgaattcaaggatctgccggtgctttcg
gcggcggcccccttcaaggccggcggtcgcggcggtgccgactactataccgacgtgccg
gccggcgacatcgccatcaagaacgtcgccgacctctatctctacccgaacacggtgcag
gctgtcgccattaccggtgcccaggtgaagaactggctcgaaatgtcggccggcatgttc
aatcacatcgaggccggctcgaaggatggcgcgctgctcaacaatgattttccgtcctac
aatttcgacgtgatcgacggcgtgacctaccagatcgacctgtcgcagccgccgaaatat
gattcgtccggcaagccgatccatccggacgccaaccgcatccagaacctcgccttcaac
ggcaagccgatcgatccggcccagaagttcgtcgtcgtctcgaacaactaccgcgccggc
ggcggcggcaatttccctgagatcaccgcagacaaggtaatcttccaggcgccggatacc
aaccgcgacgtcatcgtccgctatatccatgatcagggcacgatcaatccgtcggccgac
gccaactggaccttcaagccgcttccgggcacgaccgcgaccttcgaaagcggcccgaag
gcgaaacagttcctcgccgaggtcaagagcgtcaagatcgaggatgccggcgaaggggcc
gacggtttctcgaaattcaggctggttctttag
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