Rhizobium johnstonii: RL1985
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Entry
RL1985 CDS
T00402
Symbol
phr
Name
(GenBank) putative deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
rle
Rhizobium johnstonii
Brite
KEGG Orthology (KO) [BR:
rle00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rle03400
]
RL1985 (phr)
Enzymes [BR:
rle01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
RL1985 (phr)
DNA repair and recombination proteins [BR:
rle03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
RL1985 (phr)
Prokaryotic type
RL1985 (phr)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
CAK07478
UniProt:
Q1MHT3
LinkDB
All DBs
Position
complement(2088678..2090129)
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AA seq
483 aa
AA seq
DB search
MAKDAAKPVILWFRKDLRLDDNQALTAAHRSGRPIIPLYIGEPAAAGTGPLGAAQAWWLH
HSLEALNRSLQKRHGRLVLASGEALEVLRAFIKESGAEAVFWNRRYDPAGISIDARIKHE
LEKQAIEARSFGGQLLHEPSRLMTGNGTPYRVYTPFWRALEGGDEPEPPLEAPAELRLTS
QLPTSETLESWKLLPTKPDWAGDFVDLWTPGEEGAQQRLHAFVEDALEGYKENRDYPARP
ATSMLSPHLALGEISPARIWDATRGLSQRVPAADIVHFRKEIAWREFSYHLLFHFPRLAS
ANWNDRFDGLEWCNDSDDFEAWRRGMTGYPIVDAGMRQLWRHGWMHNRVRMIVASFLIKD
LMIDWRRGEAWFRDTLVDADPANNAASWQWVAGSGADASPFFRIFNPVLQGEKFDPNGDY
VKTYVPELRELGAKYIHRPFEAPKSMLDEAGITLGQTYPRPIVDHASARNRALAAYSATR
DAA
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
ttggcaaaggacgcggcaaaaccggtcatcctctggtttcgcaaggacttgcgccttgac
gacaatcaggcactcaccgccgcccatcgctccgggcggccgatcatcccgctctatatt
ggagaaccggcagcagcaggcaccggtccactgggtgctgcacaagcctggtggctgcat
cattcactggaagcgctcaacaggtcactgcaaaagcggcatggacggctggtgctggca
agcggcgaggcgctcgaagtgctccgcgcctttatcaaggaaagcggtgccgaagccgtc
ttctggaaccggcgctacgatccagccggaatctccatcgacgcccgtatcaagcacgaa
ctggaaaagcaggcgatcgaggcaagaagctttggcggccagctgctgcacgaaccttcc
cggctgatgaccggcaacggcacgccctatcgcgtctacacgccattctggcgcgcgctg
gagggcggcgacgaaccggagccgccgctggaggcgccggcggagctgcggctgacatcg
caacttccgacatcggaaacgttggagagctggaagctgcttccgacgaagccggactgg
gcaggcgatttcgttgatctctggacacccggcgaagagggtgcccagcagaggctccat
gccttcgttgaagacgcgctcgagggctacaaggaaaaccgagactatccagcgaggccg
gcgacgtcgatgctgtcgccgcatctggcgctgggcgagatatcccctgcccgcatctgg
gatgccacacgcggcctgtcgcaacgcgtgccggcagccgacatcgtgcattttcgcaag
gagatcgcctggcgcgaattttcctatcacctgcttttccattttccgcgtcttgcctct
gccaactggaacgatcgtttcgacggcctcgaatggtgcaacgacagcgacgatttcgag
gcgtggcgccgcggcatgaccggctatccgatcgtcgatgccggcatgcgccagctctgg
cgccatggctggatgcacaatcgcgtgcgtatgatcgtcgcctccttcctcatcaaggat
ctgatgatcgattggcggcgaggcgaggcctggttccgggatacgcttgttgatgccgat
cccgccaacaatgccgcaagctggcaatgggtggcgggatcgggagccgatgcctcgcca
tttttccgcatcttcaatccggtgctgcagggcgaaaaattcgatcccaacggcgactat
gtcaaaacctacgtgccggagcttcgagagctcggggcaaaatacatccaccggccgttc
gaggcgccgaagagcatgctcgacgaggctggcatcacgcttggccaaacctatccaaga
ccgatcgtcgatcacgcgagcgcccgcaaccgagcgctcgccgcttacagcgcaacaagg
gatgccgcatga
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integrated database retrieval system
