Rhizobium johnstonii: RL2010
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Entry
RL2010 CDS
T00402
Name
(GenBank) putative component of ABC transporter
KO
K02052
putative spermidine/putrescine transport system ATP-binding protein
Organism
rle
Rhizobium johnstonii
Pathway
rle02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rle00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RL2010
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rle02000
]
RL2010
Transporters [BR:
rle02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
RL2010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
TOBE_2
SMC_N
AAA_5
AAA
AAA_22
AAA_16
AAA_19
Ribosomal_S17
Motif
Other DBs
NCBI-ProteinID:
CAK07503
UniProt:
Q1MHQ8
LinkDB
All DBs
Position
complement(2119532..2120590)
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AA seq
352 aa
AA seq
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MTVSLTIDSISAHYGSTQVLKDLSISIMAGELVSLLGSSGCGKTTTLRLVAGFLQPSSGS
IKLGERDLTGLPAHARDIGLVFQNYALFPHLSVQDNVAFGLRQRRIPQPERAKRTMAMLD
RVGLSAFADRLPSALSGGQKQRVALARALVIEPPLLMFDEPLSNLDAKLRIDMRVEIRQL
QRANGTTSLYVTHDQEEAFSISDRVAIMNAGRIMQLDAPEVLYRQPANAFVARFVGFENL
VRMKVTGRSGALVTAETKGGARLQLSQDTFGPIKDDFVLACRADGLAVSRDGDGIAAVLG
TRTYLGRAYQYKCMTSAGEITANGALSDPLETGASAVLTPVAEQCCILDPED
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
ttgaccgtatcccttaccatcgattccatctccgcccattacggcagcacgcaagtgctc
aaggatctgtcgatctcaatcatggccggggaactggtctccctgctcggctccagcggc
tgcggaaagacgacgacattgcgcctcgtggccggttttctgcagccgagcagtggcagc
atcaagctcggcgagcgcgacctgaccggacttcccgcgcatgcgcgcgacatcggcctg
gtctttcagaactatgcgctttttcctcatctgagcgtccaggacaatgtcgccttcggc
ctgaggcagcgtcgtattccccagccggaacgggcgaaaagaacgatggcgatgctagac
cgcgtcggtctgtcggccttcgccgaccgtctgccgtcggccctgtcaggcggccagaaa
cagcgtgtggcgctcgcccgggcgctggtcatcgagccgccgcttctgatgttcgacgag
ccgctttccaatctggatgcaaagctcagaatcgacatgcgcgtcgaaatcaggcagctc
cagcgcgccaatggcacgacgtcgctttacgtcacccacgaccaggaggaggcattctcg
atctccgacagggtggcgatcatgaatgccgggcgcatcatgcagctcgacgcgccggag
gtgctgtaccgccagccggccaatgccttcgtcgcccgtttcgtcggtttcgagaacctt
gtccgcatgaaagtgaccgggcgcagcggcgcgctggtgacggccgaaacgaagggcgga
gcacggctgcagctgtcgcaggacacattcgggccgatcaaggacgacttcgtgctggct
tgccgcgcagacggtcttgccgtcagccgtgatggcgatggcatcgcggccgtgctcggc
acgcgcacctatctcggccgggcctatcagtacaaatgcatgacatcagctggagagatc
accgccaatggcgcgctgtccgacccgctggaaacaggggcgtcagcagtgctgacgcct
gtagcagagcaatgctgcattctcgatccggaagattga
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