Rhizobium johnstonii: RL2994
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Entry
RL2994 CDS
T00402
Name
(GenBank) putative transmembrane component of ABC transporter
KO
K18893
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
rle
Rhizobium johnstonii
Pathway
rle02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
rle00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
RL2994
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rle02000
]
RL2994
Transporters [BR:
rle02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
RL2994
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
SMC_N
AAA_22
AAA_16
AAA_30
Zeta_toxin
AAA_33
Motif
Other DBs
NCBI-ProteinID:
CAK08482
UniProt:
Q1MEZ2
LinkDB
All DBs
Position
complement(3158649..3160529)
Genome browser
AA seq
626 aa
AA seq
DB search
MSISDAIYRPFETLIRPLDIPYRPMPTKGPVAVLLHFIAMFRGVVITMALTSMAIEAINL
TIIWGLSVIVDGVTTHGVELFVDNNFRLLAVLAFLLFPVMPVLFYITNILNSHTIGISLP
VAIQWQGHKAVERQDLAFFHDLFAGQVASRLGQVANAVQQQILIAFQTAPRFLLQIIGSV
VLLLTLSWQLALPVIVWVAFNVLFAIKVVPDFTERARRSAKQNSLISGALTDIYGNIQMV
KQFAAEDSEAGALRKIMSKGVDTLHHEQRIYRTTELVVISLNMVLWLVMLGIGFWGLFDR
FLTVGDFAATVYILQRLSAGSFTFLQMGQQIFRALGTIKDAMPVMTTPPTITDRPDAAEL
TVSRGGIHFENVRFAYKSGKPVIDDLSLMVRPGEKVGLVGLSGAGKTTLVSLLLRFYDIE
DGAILIDGQDIRAVTQASLRRAIGVIAQDVALLHRSVGDNIRYGRPEATTDEIEAVAKMA
SADAFIADLSDGEGRKGYDAFVGDRGIKLSGGQRQRVAIARVLLKDAPILVLDEATSALD
SESEAAIQERLNLVMEGKTVIAIAHRLSTIARMDRIVVLDHGRIVEEGRPDELVEQDGLF
ARLWKRQTGGFIPEDIDEPLPASPAT
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatttcagatgctatctatcgtcccttcgaaaccttgatccggccactcgacatc
ccctaccggccgatgcccaccaaagggcccgtggcagtcctcctacacttcatcgcgatg
tttcggggcgtcgtcatcaccatggcgctgacctcgatggccatcgaagccatcaacctt
acgatcatctggggtctttcggtcattgtcgacggagtgacgacacacggcgtggaactc
ttcgtcgacaataatttccggctgctggcagtcctcgcctttctgctttttcccgtgatg
cccgttcttttctacatcaccaatattctcaactcgcatacgatcggcatcagcctgccc
gttgcgattcaatggcaggggcacaaggcggtcgagcggcaggacctcgccttcttccat
gatcttttcgccggccaggtcgcatcccggctcggtcaggtcgccaatgccgttcagcaa
cagatcctgatcgcgttccagacggcaccgcgctttctgcttcagattatcggctccgtt
gttcttctgctcacgctctcctggcagcttgcgctgccagtcatcgtctgggttgccttc
aacgtgctctttgcaatcaaggtcgttccggatttcacggagcgcgcccgccgctcggca
aagcagaacagccttatctccggtgccctgacggacatctacggcaacatccagatggtc
aagcagttcgcagcagaagacagcgaggcaggcgcgctgagaaagatcatgtccaagggg
gtcgatacgcttcaccacgaacagcgcatctaccggacaaccgaactcgtcgtcatcagc
ctcaacatggtgctctggctcgtcatgctcggcattggtttctgggggctgtttgaccga
ttcctgaccgtgggcgatttcgccgcaacagtttacatcctccaacgcctctcggcaggg
tccttcaccttcctgcaaatgggacaacagatcttccgcgcgctcggcacgatcaaggac
gccatgccggtcatgacaacaccgcccaccatcaccgatcggccggatgcggccgaactg
acggtcagccgtggggggatccatttcgagaacgtccgcttcgcctacaagtccggcaaa
cctgtcatcgatgacctgtcgctgatggttcggccgggcgaaaaggtagggctcgtcggc
ctctccggtgctggcaagacgacgctggtcagcctgctgctgcgtttttacgacatagag
gacggcgctatcctgatcgacgggcaggacatccgcgcggtcacgcaggcaagccttcgc
cgagccatcggcgtcatcgcgcaggacgtcgcgctgctgcaccgttcggtcggcgacaat
atccgctacggccggccggaggcgacgacggacgagatcgaagcggtggcgaagatggcc
agcgccgatgccttcatcgccgatctttccgacggcgaaggccgcaagggctatgacgcc
ttcgtcggcgaccgcggtatcaaactgtcaggcggccagcgccagcgcgtggccatcgcc
cgcgttctcttgaaggacgcgccgatcctggtcctcgacgaggcgacctctgccctcgac
agcgaatccgaagccgccatccaggaaaggctgaacctcgtcatggagggaaagacggtg
atcgccatcgcccaccgcctgtcgaccattgccagaatggaccggatcgtcgtgctcgat
cacgggcgcatcgtggaggagggcaggccggacgaactggtcgagcaggatggcctgttt
gcccgcctgtggaaacgccaaaccggcggcttcatacccgaagacatcgacgaacccttg
ccggcctcgccggcgacctga
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