Rhizobium johnstonii: RL3248
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Entry
RL3248 CDS
T00402
Name
(GenBank) putative GntR family transcriptional regulator
KO
K00375
GntR family transcriptional regulator / MocR family aminotransferase
Organism
rle
Rhizobium johnstonii
Brite
KEGG Orthology (KO) [BR:
rle00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rle03000
]
RL3248
Transcription factors [BR:
rle03000
]
Prokaryotic type
Helix-turn-helix
GntR family
RL3248
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aminotran_1_2
GntR
HTH_41
Rrf2
Motif
Other DBs
NCBI-ProteinID:
CAK08736
UniProt:
Q1ME90
LinkDB
All DBs
Position
3397799..3399307
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AA seq
502 aa
AA seq
DB search
MSKRRSIIEIPSLNAIDRTANVGRQLAQALRNAIARGELRSGERLPSTRSLAASLKIARG
TVVEVFDQLTAEGYLQARVGSGTRVAADLIDATPALPPQPAVPSSADAVDLPSQAARLIA
IARALTPHPPVPFAIAVPACGIAPDDNWRRLGNRVRASRQAAPSGYHDPMGLLELRLAIA
DHVRRARAVHCEPEQVIVTSGTQQGLYMAGRVLLSRDDAVWAEDPAYPGLTAVLDDLGVR
THRLPVDVQGMNVERGLELCPQARAAFVTPSHQYPIGMPLSMARRNSLITWADQNRAWIV
EDDYDSELRYAGHPFPSMQGLRPSRVIYLGTFSKVLFPSLRLGYVIAPPPLAEAFAGARA
ILDRHSPIAEQHVLAAYMREGYFEAHIRRIRGLYAERRAVLLTALDRVLPEGCGVQQSDH
GMHILLWLPEEVDDVQLAARALSAGLAVRAISPMYAAQPARPGLMLGFGGFLPDQLQAAV
GELVKLLSQQMPQAGGPQQAEA
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaacggcgaagcatcatcgagataccatcgctgaacgctatcgatcgaacggcc
aatgtcggtcgccagcttgcgcaggccctgcgcaacgcaatcgcccgcggtgagctgagg
tcgggagaacgccttccgtcgacgcgtagccttgcggcttcgctgaagatcgcgcgcggc
actgtcgtcgaggtgttcgatcagttgaccgccgaaggctatctccaagcgcgggtcgga
tccggaacccgtgttgccgccgatctgatcgacgcaacgccggcgctcccgcctcagccg
gcagtgccgtcaagcgcggatgctgtcgacttgccttcccaggctgcccggctgatcgcc
atcgcccgcgcgctcacccctcacccgcccgttcccttcgccatcgccgtcccggcttgc
ggtattgcgcccgacgacaactggcgccgtctcggcaatcgcgtgcgcgcgtcgcgacag
gccgcaccctcgggttaccacgatcctatgggtttgctcgaactcaggcttgccattgcc
gaccatgtccgccgcgcacgggccgttcattgtgagccggaacaggtcatcgtcacgtca
ggcacccagcaaggcctctatatggcaggccgggtacttctctcgcgtgacgatgcggta
tgggccgaggacccggcctatcccggcctgacggcggtgctcgatgatctcggcgtccgg
acgcaccgcctgccggtcgatgtacagggaatgaatgtcgaacgcggcctcgagctatgc
ccgcaggcgcgcgcggcattcgtgaccccttcgcaccaatatccgatcgggatgccgctc
agcatggctcggcgcaattccttgatcacctgggccgaccaaaatcgcgcctggatcgtc
gaagacgactacgacagcgagctgcgttatgccggacacccctttccctcgatgcaggga
ttgcgtccctcacgcgtcatctatctcggcacgttcagcaaggtgctctttccttccctg
cgcctcggctacgtgatcgcccctcctcccctcgcagaagcctttgccggcgcccgcgcc
attctcgaccggcattcgccgatcgccgaacagcatgttctggcggcctatatgcgggaa
ggctatttcgaagcgcatatccggcgcatccgcggcctctatgccgagcgccgcgctgtt
ctgcttacggcgctcgatcgggtcttgcctgagggctgcggcgtgcagcagagcgaccac
ggcatgcatattcttctatggctgcccgaggaggtcgacgacgtgcaactcgcagcccgc
gccctctcggccggcctcgccgtgcgggcgatctccccgatgtatgccgcccagccggcg
cgccccggcttgatgctgggcttcggcggatttctgccggaccagctgcaggcggcggtc
ggcgaactcgtcaaactgctgagccagcagatgcctcaagcgggaggcccgcaacaagct
gaagcctaa
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