Rhizobium johnstonii: RL3311
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Entry
RL3311 CDS
T00402
Symbol
murF
Name
(GenBank) putative UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase
KO
K01929
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:
6.3.2.10
]
Organism
rle
Rhizobium johnstonii
Pathway
rle00300
Lysine biosynthesis
rle00550
Peptidoglycan biosynthesis
rle01100
Metabolic pathways
rle01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
rle00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
RL3311 (murF)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
RL3311 (murF)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
RL3311 (murF)
Enzymes [BR:
rle01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.10 UDP-N-acetylmuramoyl-tripeptide---D-alanyl-D-alanine ligase
RL3311 (murF)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
TilS_C
Motif
Other DBs
NCBI-ProteinID:
CAK08798
UniProt:
Q1ME29
LinkDB
All DBs
Position
complement(3472066..3473499)
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AA seq
477 aa
AA seq
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MSWLWTTEDMIAVMAGRPFGTLPEGITGISIDSRSITPGEAFFAIKGDRVDGHDYASMAM
ANGASLLIVSEARLPAMGRLTVPMIVVEDVLAALGRLGLASRERSRARIIAVTGSVGKTT
TKEMLRHVLSPSGKVHASVASFNNHWGVPLTLARMPEDTDYGVFEVGMNHPGEIRPLVAM
IRPDVAIITTIAPAHLGNFKNIKEIAAAKAEIFEGLEPGGHVVLNRDNDQFNFLDRTAQS
LGIEHIHSFGQHAKAEFRLAEFNGSDENSTLWLTIGGETLEVALGAPGRHIAENALAALG
VVRIVGADMQKAIEALATLRPEKGRGKRHRLVIGGGSFTLIDESYNANPASMRAAIALLA
ASEPTGRGRRIAVLGDMLEMGEYAQKVHTDLAVPLLAAGIEHVWLAGAEMAALKESLPES
VHVEYRENTSELTDYVLNSVAPGDVLMVKSSLGIGFGKIVAALLDKFPPFADTQREF
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
ttgagctggctctggacgacggaagacatgatcgcagtgatggcggggcgccctttcggc
acgctgcccgaaggcatcaccggcatttccatcgacagccgctcgattactccaggcgaa
gctttcttcgcgatcaagggcgaccgcgtcgacggtcacgactacgcctcgatggcgatg
gcgaacggcgcttcccttctcatcgtcagcgaggcgaggcttcccgccatgggccgcctg
acggtgccgatgatcgtcgtggaagacgtgctcgcggcactcggccggctcggccttgcc
tcgcgcgagcgttcgcgggctcggatcatcgcggtgacggggtctgtgggaaagacgacc
accaaggaaatgctgcggcatgtgctgtcgccctccggcaaggtgcacgcctccgtcgcc
tccttcaacaatcattggggcgtgccgctgacgctggcgcgcatgcctgaggatacggat
tatggcgtcttcgaagtagggatgaaccaccccggcgagatccggccgctggtggcgatg
atccgtcccgatgtcgccatcatcacgacgatcgcgccggcgcatctcggcaatttcaag
aacatcaaggaaattgccgccgccaaggccgagatcttcgaggggctcgaacccggcggc
catgtcgtgctcaaccgcgacaacgaccagttcaatttcctcgaccgcacggcgcagtcg
ctcggcatcgagcatattcattctttcggccagcatgccaaggccgaattccggctcgca
gaattcaacggttccgacgagaattcgacgctgtggctgacgatcggcggcgagacgctg
gaggtcgcgctcggcgcaccgggccgccatatcgccgagaatgcgctcgcagcgctcggt
gtcgtcaggatcgtcggcgccgatatgcagaaggcgatcgaagcccttgcgacgctgagg
ccggaaaagggcaggggcaagcgccaccggcttgtcatcggcggcggcagcttcacgctg
atcgacgagagctacaatgccaatccggcttcgatgcgcgcggcgatcgcgctgctggcg
gcctccgagccgaccggccgcggacgccgtatcgccgtgctcggcgacatgctggagatg
ggcgagtatgcgcaaaaggtccataccgaccttgccgtgccgctgcttgctgccggcatc
gaacatgtgtggctcgcaggagcggagatggctgcgctcaaggaatcgttgccggaaagc
gtccatgtcgaatatcgcgagaacactagcgaattgacggattatgtattgaactcggtc
gcgccaggcgacgtgttgatggtgaaatcgtctctgggcatcggtttcggcaagatcgtc
gccgcgctccttgacaagttcccgccatttgccgacacgcaacgcgaattttga
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