Rhizobium johnstonii: RL3358
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Entry
RL3358 CDS
T00402
Name
(GenBank) putative transmembrane component of ABC transporter
KO
K10118
raffinose/stachyose/melibiose transport system permease protein
Organism
rle
Rhizobium johnstonii
Pathway
rle02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
rle00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
RL3358
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rle02000
]
RL3358
Transporters [BR:
rle02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Raffinose/stachyose/melibiose transporter
RL3358
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BPD_transp_1
CcmD_alt
Motif
Other DBs
NCBI-ProteinID:
CAK08845
UniProt:
Q1MDY2
LinkDB
All DBs
Position
complement(3525008..3525955)
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AA seq
315 aa
AA seq
DB search
MSETDNTVDIVPIRRPVRWHIFVFMLPALIVYSAVMVLPLIETLRLSLYNTVDGQPAFVG
LANFKVLFGDARWARDFWNALVNNLIFFAIHMCVQNPIGVALAALLSVPKLRGVAFYRTA
MFLPTLLSFVIVGFIWKLILSPIWGVAPWMLDLIGLKFLFAPWLGKSGSALIAVSLISNW
QYIGIPMMLIYAALLSIPEEVIEAAECDGITGWAQFWKIKLPLILPAIGIISILTFVGNF
NAFDLVYTVQGALAGPDMSTDILGTLLYRTFFGFQLQLGDRSMGATIATVMFLIILAGVS
LYLFVIQRRMRRYQF
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaaaccgacaacacggtcgatatcgtcccgatcaggcgcccggtgcgctggcac
atcttcgtcttcatgttgccggccctgatcgtctattccgcggtcatggtgctgccgctc
atcgaaactctccggctgtcgctctacaatacggtcgacgggcagccggccttcgtcgga
ctggcgaatttcaaggtgctgttcggcgatgcgcgctgggcgcgcgatttctggaatgcc
cttgtcaataacctgatcttctttgccatccacatgtgcgtgcagaacccgatcggcgtg
gcgcttgccgccctgctttcggtgccgaagctgcgcggcgtagccttctaccgcacggcg
atgtttctgccgacgctcctgtccttcgtcatcgtcggcttcatctggaagctcatcctc
tcgccgatctggggcgtggcgccctggatgctcgatcttatcggcttgaaattcctgttc
gcaccttggctcggaaagtccggttcggcgctgatcgcggtgtcgctgatctcgaactgg
caatatatcggcattccgatgatgctgatctatgccgcactgctcagcatccccgaagag
gtgatcgaggcggccgaatgcgacggcatcaccggctgggcccaattctggaaaatcaag
ctgccgctcatcctgccggcgatcggcattatctcgatcctgaccttcgtcggcaatttc
aatgccttcgacctggtctataccgtgcagggggcgcttgccggacctgacatgtcgacc
gacattctcggcacgctgctctaccgcaccttcttcggtttccagcttcagctcggcgac
cgctcgatgggcgcgacgattgccacggtgatgttcctcatcatcctcgccggcgtctcg
ctttatctgttcgtcatccagcggcgcatgcgtcgctaccaattctga
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