Rhizobium johnstonii: RL3426
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Entry
RL3426 CDS
T00402
Symbol
dctD
Name
(GenBank) putative C4-dicarboxylate transport two-component response regulator sigma 54 transcriptional regulatory protein
KO
K10126
two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD
Organism
rle
Rhizobium johnstonii
Pathway
rle02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
rle00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
RL3426 (dctD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
rle02022
]
RL3426 (dctD)
Two-component system [BR:
rle02022
]
NtrC family
DctB-DctD (C4-dicarboxylate transport)
RL3426 (dctD)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
AAA_5
HTH_8
AAA_2
Mg_chelatase
AAA_16
Zeta_toxin
T2SSE
RTP1_C2
AAA
CUE
HTH_30
FleQ
AAA_3
Motif
Other DBs
NCBI-ProteinID:
CAK08914
UniProt:
Q1MDR3
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All DBs
Position
3601420..3602766
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AA seq
448 aa
AA seq
DB search
METRTPVALIDDDKDLRRATAQTLELAGFSVSAYDGAKAALADLPADFAGPIVTDIRMPE
IDGLQLFATLQGMDADLPVILMTGHGDIPMAVQAIQDGAYDFIAKPFAADRLVQSVRRAS
EKRRLVLENRMLRKAAEDAQENLPLIGQTPVMENLRNILRHIADTDVDVLVAGETGSGKE
VVAQLLHQWSHRRRGNFVALNCGALPETVIESELFGHETGAFTGAQKRRTGRIEHASGGT
LFLDEIESMPAATQVKMLRVLEMREITPLGTNEVRPVDLRVVAAAKIDLGDPSVRGDFRE
DLYYRLNVVTISIPPLRERRDDIPLLFSHFAARAAERFRRDVPPLSPDVRRHLASHTWPG
NVRELSHYAERVVLGVEGGGTAAVPSQPTDATLPERLERYEAEIIRDALSANDGDVRRTI
EALGIPRKTFYDKLQRHGINRGGYISRK
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atggaaacgcggacccctgttgcgctgatcgacgacgacaaggatctgcgccgcgccacc
gcgcagacgctcgaactcgccggattttccgtttccgcctatgacggtgcaaaagccgcg
ctggcagacctgccggcggattttgctggccctatcgtcaccgatatccgcatgccggag
atcgacggactgcaactcttcgccaccctacaaggcatggatgccgacctgccggtgatc
ctgatgaccggccacggcgatattcccatggccgttcaggcgatccaggacggcgcctat
gatttcatcgccaagcccttcgcagccgatcggctcgtgcagagcgtgcgtcgcgcaagc
gagaagcggcggcttgttctggaaaaccgcatgctgcggaaggcagccgaagatgcgcag
gagaacttgccgctgatcggccagacgcccgtcatggaaaacctcagaaacattcttcgc
catatcgccgataccgacgtggacgtgctcgtcgccggcgaaacgggcagcggcaaggaa
gtggtcgcccagcttctgcatcagtggagccaccgccggagaggaaattttgtggcgctg
aattgtggcgccctgcccgaaaccgtcatcgaaagcgaactgttcggccacgagaccggt
gcctttaccggcgcccagaagcgccgcacgggccgcatcgaacatgcaagcggcggcacg
cttttcctcgacgagatcgaaagcatgccagccgccacccaggtcaagatgctgagggtg
ctggagatgcgcgagatcacgccgcttggcaccaacgaggtgcgtccggtcgatcttcgc
gtcgtcgcggctgccaagatcgacctcggagatccctcggtgcgcggcgattttcgcgag
gatctctattacaggctgaatgtcgtgacgatctccattccgccgctgagagaacgccgc
gacgatattccgctgctgttttcccacttcgccgctcgcgccgccgagcgcttccgtcgc
gatgtcccgccgctttcaccggatgtgcggcggcatctcgcctcgcacacatggccgggc
aatgtccgcgaactctcgcattatgccgaacgcgtggtgcttggcgtggaaggcggtgga
acagcagccgtcccttcgcagccgacggatgcgacgcttcccgaacggctggagcgctac
gaggcggagatcattcgcgacgcgctgtcggccaatgacggcgacgtccgccgcaccatc
gaggcgctcggcattccgagaaagacgttctacgacaaactccagcgccacggcatcaac
cggggtggctatatctcgcgcaagtaa
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