Rhizobium johnstonii: RL3488
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Entry
RL3488 CDS
T00402
Name
(GenBank) putative ATP-binding component of ABC transporter
KO
K18893
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
rle
Rhizobium johnstonii
Pathway
rle02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
rle00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
RL3488
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rle02000
]
RL3488
Transporters [BR:
rle02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
RL3488
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
SMC_N
MMR_HSR1
AAA_22
RsgA_GTPase
AAA_30
AAA_29
AAA_21
DUF87
ATP-synt_ab
AAA_16
AAA_18
Septin
Motif
Other DBs
NCBI-ProteinID:
CAK08976
UniProt:
Q1MDK1
LinkDB
All DBs
Position
complement(3659154..3661067)
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AA seq
637 aa
AA seq
DB search
MLLNPILRRFETWIDPFRPRANLQPPRSTLGFIWFYIGQARMPFIAMLVLGGTSAAIEAA
LFWFVGRLVDILGSITPGAGWSGLLAAHGGELFGMLALIGLVRFVIAFLIALVDQQVITP
GFYNLARWQSYLHVSRQSLSFFQSDFSGRIVTKVWSAGQATGDLVTSLMESVWFVGIYAA
TTLVLVARLDFSLAAVVLFWLGAFSLLARHFVPRIRHHSRETAEAGSMLNGRMVDSYSNM
QTLKLFARDEESDRYMRQGFDIYQDTVLRFTRFITGVRASMALLSGLMIVTMAGLSVDLW
LRGLVSSGAVAFSLALVLRLNFLLGRLMTQFNGIMRNLGTIQNAAELISQPLGLVDRADA
KTLVIRQPGVRFDNVSFRYGKDHQPVVENFSLTIRPGEKVGIVGRSGAGKSTLMNLLLRL
YDIQDGRILIDGQDIAAVTQESLRMQIGVVSQDTSLLHRSVRDNILFGRPDAGEEGLVEA
ARRAEAIDFIARLQDQQGRRGFDAHVGERGVKLSGGQRQRIAIARVMLKDAPILVLDEAT
SALDSEVEEAIQSNLHQIMEGKTVLAIAHRLSTIAALDRLIVVDLGRIIEEGSHDELLRH
GGLYAELWARQSGGFLATDADAGSRVDDEFRHEAKMI
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atgttgctgaaccccatcctccgccggttcgaaacctggatcgatccgttccgcccacgc
gccaatctccagccgccgcgttcgacgctcggcttcatatggttctatatcggccaggcg
aggatgccgttcatcgccatgctcgttctcggcggcacgtcggcggcgatcgaggcagcg
ctcttctggttcgtcgggcggctcgtcgatatcctcggcagcatcacgccgggtgccggc
tggagcggtcttctcgctgcccatggcggcgagctgttcggcatgctcgccctcatcggg
ctggtgcgcttcgtcatcgccttcctgatcgcgctcgtcgaccagcaggtgatcacgccg
ggcttctacaatctcgcacgctggcaatcctatctccacgtctccaggcagtcattgtcg
ttcttccagagcgatttttccggacgcatcgttaccaaggtctggtcggccgggcaggcc
accggcgacctcgtcacctcgctgatggaaagcgtctggttcgtcggcatctatgccgcc
accacgctcgtgctcgtcgcccggttggacttttcccttgccgccgtcgtgctgttctgg
cttggcgccttcagcctgcttgcccgtcacttcgtcccgcggatccgccatcattcccgc
gaaacggcggaagccggatcgatgctgaacggcaggatggtcgactcctacagcaacatg
cagacgctgaagctgtttgcacgcgacgaggagagcgaccgctacatgcggcagggcttc
gatatctatcaggatacggtgctgcgcttcacgcgtttcatcaccggcgtcagagcctcg
atggcgctgctctccggcctgatgatcgtgacgatggcggggttgagcgtcgatctctgg
ctgcgcggcctggtcagctccggtgccgtggcattctccctggcactggtgctcaggctg
aattttctgctgggacggctgatgacgcagttcaacggcatcatgcgcaatctcggcacc
atccagaacgccgccgagctgatctcgcagcctctggggctcgtcgatcgggctgatgcg
aagaccctggtgatccggcagcccggtgtccgcttcgacaatgtttcgttccgctacggc
aaggaccaccagccggtcgtcgagaatttctcgctaaccatccgccctggcgaaaaggtc
ggaatcgtcggccgttcgggcgccgggaaatcgacgctgatgaacctgctattgcgcctc
tacgatattcaggacggccgcattctcatcgacggccaggatatcgcagccgtgacgcag
gaatccctcaggatgcagatcggcgtcgtcagtcaggacacctcgctgctgcatcgttcg
gtgcgcgacaatatcctgttcgggcggcccgatgccggcgaggaggggctggtcgaggcg
gccaggcgcgccgaagccatcgatttcattgcccgcctgcaggatcagcagggtcgcaga
ggtttcgatgcgcatgtcggcgaacgcggagtcaaactgtccggcgggcagcggcagcgc
atcgcgattgcccgcgtcatgctgaaggacgcgccgatcctcgttctcgacgaagcgaca
tcggcactcgattctgaagtggaagaagctatccagtccaatctccatcagatcatggaa
ggaaagacggtgcttgcgatcgcccatcggctgtcgacgatcgccgcgctcgaccggctg
atcgtcgtcgatctcggacggatcatcgaggaaggcagccatgacgaattgcttcgccac
ggcgggctttatgccgaactttgggcgcgccagtccggcggattccttgctacggatgct
gatgcgggctcaagggtcgacgacgaattccgccatgaggccaaaatgatttga
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