Rhizobium johnstonii: RL3490
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Entry
RL3490 CDS
T00402
Name
(GenBank) putative ATP-binding component of ABC transporter
KO
K18893
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
rle
Rhizobium johnstonii
Pathway
rle02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
rle00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
RL3490
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rle02000
]
RL3490
Transporters [BR:
rle02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
RL3490
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
SMC_N
RsgA_GTPase
MMR_HSR1
AAA_22
AAA_16
AAA_30
AAA_29
MobB
AAA_21
TPR_DOP1
AAA_24
Motif
Other DBs
NCBI-ProteinID:
CAK08978
UniProt:
Q1MDJ9
LinkDB
All DBs
Position
complement(3661573..3663429)
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AA seq
618 aa
AA seq
DB search
MFGWFEQRLNPFPSEDPVAPPKGLFAFCWHYSKPAAPWLGLMAVLTALIAIGEVALFQFL
GDIVDWLTNADRATFLEREGHKLFWMAALVLIGLPVVAGLDSLIMHQMMLGNYPMIARWQ
MHRFLLRHSMSFFANEFAGRVATKVMQTSLAVRETVMKILDVFVYVVTYFLTMIIVIAAA
DWRLMIPILVWLAVYISIVAYFVPRLRKIAAAQADARSMMTGRVVDSYTNIATVKLFSHA
GREEVYAKEGMDEFLQTVHKQMRKVTLFHIFVYVNNCVALFVISGLSIWFWLNGAISVGA
IAIAIGLAMRVNGMSQWIMWEVSALFENIGTVYDGMEMMSKQHDIVDKPGAPTLTAKKGA
IHYDRIRFHYGKSKGVIDNLSLDIKAGEKVGLVGRSGAGKTTLMNLLLRFYDLEAGRITI
DGQDIAGVSQESLRSLIGVVTQDTSLLHRSIRDNIAYGRPDATDAEVIEAAKRANAWEFI
EGLVDLQGRAGLDAQVGERGVKLSGGQRQRVAIARVFLKDAPILVLDEATSALDSEVEAA
IQENLFALMEGKTVIAIAHRLSTLTEMDRLIVLDKGRIIEAGSHSELIEAGGIYADLWNR
QSGGFLSDHADEAEVAAE
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atgtttggctggttcgaacagcgactcaatccctttccaagcgaggaccctgtcgccccg
ccgaaaggtctctttgccttttgctggcattacagcaagccggctgcgccctggctcggc
ctgatggccgtgctgaccgcgctgatcgctatcggcgaagtggcgctcttccagttcctc
ggcgacatcgtcgactggctgaccaatgccgaccgcgccacattcctggagagagaaggc
cacaagcttttctggatggcggcgctggtgctgatcggcctgcctgtcgtagccgggctc
gattcgctcatcatgcatcagatgatgctcggcaattatcctatgattgcacgctggcag
atgcaccgcttcctgctgcgccacagcatgtcgttcttcgccaacgaatttgccgggcgt
gtcgccaccaaggtgatgcagacctcgcttgccgtacgcgaaacggtgatgaagatcctc
gacgtcttcgtctatgtcgtcacctacttcctgacgatgatcatcgtgattgcggcggcg
gactggcggctgatgatcccgatcctcgtctggctcgcggtctatatcagcatcgtcgcc
tatttcgtgccgcggcttcgcaagatcgcggcggcgcaggcggatgcgcgttcgatgatg
acgggccgcgtggtcgacagctatacgaatatcgcgacggtcaagctgttttcgcatgcg
ggccgcgaggaggtctatgccaaggagggcatggacgagttcctgcagaccgtgcacaag
cagatgcgcaaggtgacgctcttccacatcttcgtctacgtgaacaactgcgttgcgctc
tttgtcatctcgggcctgtcgatctggttctggctgaacggggcgatctcggtcggcgcg
atcgccatcgctatcggtctcgccatgcgcgtcaacggcatgtcgcaatggatcatgtgg
gaagtctcggcgctgttcgagaatatcggcacggtctatgacggcatggagatgatgagc
aaacagcacgacatcgtcgacaagccgggcgcacccaccctgacggcgaagaagggcgcg
atccactacgaccgcatccgcttccactacggcaagagcaagggcgtcatcgacaacctg
tcgcttgacatcaaggcaggcgagaaggtcggtctggtcggccgttccggtgccggcaag
acgacgctgatgaacctgctgctgcgcttttacgatctggaggctggccgcatcaccatc
gacgggcaggatatcgccggtgtctcgcaggaaagcctgcgttcgctgatcggcgtggtg
acgcaggacacctcgctgctgcatcgctcgatccgcgacaacatcgcctatggtcgcccc
gatgcaacggacgccgaggtgatcgaggccgccaaacgcgccaatgcctgggagttcatc
gaaggtctcgtcgacttgcagggccgcgcggggctcgacgcgcaggtcggcgaacgcggc
gtcaagctctccggcggccagcggcagcgcgtcgcgatcgcccgcgtcttcctgaaggac
gcgccgatcctggtgctcgacgaggcgacttcggcgctcgattcggaagtcgaggcggcg
atccaggaaaacctcttcgccttgatggagggcaagacggtgatcgccatcgcccaccgc
ctgtcgaccctgacggagatggaccggctgatcgtgctcgacaagggccggatcatcgag
gccggctcgcacagcgaactgatcgaagcaggcggtatctatgccgacctctggaaccgc
cagtccggcggcttcctctccgatcacgccgacgaagcggaagtggcggcggaataa
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