Rhizobium johnstonii: RL3496
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Entry
RL3496 CDS
T00402
Symbol
papS
Name
(GenBank) putative poly(A) polymerase
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
rle
Rhizobium johnstonii
Pathway
rle03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rle00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RL3496 (papS)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rle03019
]
RL3496 (papS)
Enzymes [BR:
rle01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
RL3496 (papS)
Messenger RNA biogenesis [BR:
rle03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
RL3496 (papS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_RNAbd
tRNA_NucTran2_2
DUF348
Motif
Other DBs
NCBI-ProteinID:
CAK08984
UniProt:
Q1MDJ3
LinkDB
All DBs
Position
complement(3668166..3669419)
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AA seq
417 aa
AA seq
DB search
MTGIADQAWFRDPALGRILALLSADGGEGRVVGGAVRNSLMGLPVNDIDIATTLRPETVM
ERAEAAGIKAVPTGLDHGTVTLVIDGKPFEVTTLRTDVETDGRRAKVAFSTDWKADAERR
DLTINALYADAGGEVVDLVGGLADIERRNIRFIGDAAMRIAEDHLRILRFFRFFAYYGSG
RPDAEGLKACSAARSKLTSLSAERVWSELRKLLGAADPGRALLWMRQVAVLTEILPETER
WGIDAIPSLITTEKALGWSPDPLLRLAAIVPPDVARLEALAARLKLSNAEAATLKAWAMA
APVNDDMSSAAFERLLYRNGAGGITTRLKLALAVARGKAESDFDEMARSARLIKLLDRAM
HWKKPQFPLNGGDVISAGIASGPRVGELLAGLENQWVEENFVSDRAALLARLQERVQ
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgaccggcatcgccgaccaagcatggttccgcgacccggccctcggccggatcttagcg
cttctcagcgccgatgggggggaagggcgggtggttggcggtgctgtgcgcaacagcctg
atgggcctgccggtcaatgatatcgacatcgccacgacactcagaccggagacggttatg
gaacgggcggaggcggccggcatcaaggcagtcccaaccggtctcgatcacggcacggtg
acgctcgtcatcgacggcaagcccttcgaggtgacgacccttcgcaccgacgtcgagacc
gacggacgccgtgccaaggttgccttcagcaccgactggaaggcagacgccgaacggcgg
gatctgacgatcaacgcgctttatgccgatgcggggggcgaagtggtcgacctcgtcggt
gggcttgccgacattgagaggcgcaacatacgcttcatcggcgatgcggcaatgcgtatt
gccgaggatcatctgcgcatcctgcgttttttccgcttctttgcctattatggttccgga
cggccggatgcagaggggctgaaggcatgctccgcggcgcgttcgaaactgacgtcgctt
tcggcagaacgggtctggtctgaactgcgaaagctgctaggtgctgccgatcccggccgc
gcgctgctctggatgcggcaagtggcggtgctgacggaaattctgccggaaaccgaacga
tgggggatcgatgcgatcccttcgctgatcaccaccgaaaaggcgctcggctggtcgccc
gatccgctgctgcgcctagcggcgatcgtgccgcccgatgtggcgcggctggaggcgctt
gcagcccggctcaagctctcgaatgcggaagcggccactctcaaggcctgggcaatggca
gcgccagtcaatgacgacatgtcgtcggccgccttcgaacggctgctttaccgcaacggc
gccggcggcatcacgacacggctgaagctggcgcttgcggttgcgcgcggcaaggctgaa
agcgatttcgatgaaatggcgcggtcggcgcggcttatcaagctgctggacagggcaatg
cattggaagaagccacagtttccgctgaacggtggtgacgtgatttcggcgggaatcgcg
tccggtccgcgcgtcggcgagctgctggccggtctggaaaaccagtgggtggaggaaaac
ttcgtttccgaccgggcggcgctgctcgcccggctgcaggaacgcgtgcaataa
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