Rhizobium johnstonii: RL3545
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Entry
RL3545 CDS
T00402
Symbol
oppC
Name
(GenBank) putative transmembrane component of ABC transporter protein
KO
K15582
oligopeptide transport system permease protein
Organism
rle
Rhizobium johnstonii
Pathway
rle01501
beta-Lactam resistance
rle02010
ABC transporters
rle02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rle00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
RL3545 (oppC)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RL3545 (oppC)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
RL3545 (oppC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rle02000
]
RL3545 (oppC)
Transporters [BR:
rle02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Oligopeptide transporter
RL3545 (oppC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_1
OppC_N
Motif
Other DBs
NCBI-ProteinID:
CAK09033
UniProt:
Q1MDE4
LinkDB
All DBs
Position
3723988..3724905
Genome browser
AA seq
305 aa
AA seq
DB search
MILNPAKRELLAQELLEAEGLAPQSRSLTKDALRRLGRNKAAVLSIVVLTVLILAAFLGP
WFIPFNYEDPDWAAFRIPPSIETGHYFGTDPNGRDLLARVLYGTRVSLAVALTATVVSVF
IGVLYGAVSGYIGGRLDAIMMRFVDIMYALPYILFVILLMVIFGRNVYLLFAAIGALEWL
TMARIVRGQTLSIKHREFLEAARASGQRPFKIIIKHIIPNLVGPVVIFAALTVPEIIATE
SFLSYLGFGVQEPLTSLGTLIAEGTDAMESMPWLLVFPASFLVALLLSLLFIGDGLRDAF
DPKDR
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgatcctaaaccccgcaaaacgcgagctgctcgcccaggagcttctggaggcggaaggc
cttgctccccaaagccgctcgctcaccaaggatgccttgcgccgccttgggcgcaacaag
gccgccgtcctgtcgatcgtcgtcctgacggtactgatcctcgccgccttcctcggcccc
tggttcattcccttcaactatgaggatccggattgggcagccttccgcataccgccctcg
atcgagaccggccactatttcggcaccgatccgaacggccgcgaccttctcgcccgcgtc
ctttacggcacccgcgtctcgcttgccgtggcgctgacggcgaccgtcgtctccgtcttc
atcggcgtgctctacggcgcagtatcgggctatatcggcggcaggctggatgcgatcatg
atgcgcttcgtcgacatcatgtatgcgcttccctatatcctcttcgtcatcctgctgatg
gtgatcttcggccgcaacgtctatctgctgtttgctgccatcggcgcgctggaatggctg
accatggcccgcatcgtgcgcggccagactctgtcgatcaagcatcgcgaattcctcgaa
gcggcccgcgcatccgggcagcggccgttcaagatcatcatcaagcacatcatcccgaac
ctcgtcggacccgtggtcatcttcgcagcgttgacggtgcctgaaatcatcgccaccgaa
agcttcctctcctatctcggcttcggcgtgcaggagccgctgacctcgctcggcacgctg
atcgccgagggaaccgatgccatggaaagcatgccgtggctgctggtcttcccggcaagc
ttcctcgtggccctgttgctcagcctgctcttcatcggcgacggcctgcgcgacgcgttc
gacccgaaggatcgctaa
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integrated database retrieval system
