Rhizobium johnstonii: RL3546
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Entry
RL3546 CDS
T00402
Symbol
oppD
Name
(GenBank) putative ATP-binding component of ABC transporter protein
KO
K15583
oligopeptide transport system ATP-binding protein
Organism
rle
Rhizobium johnstonii
Pathway
rle01501
beta-Lactam resistance
rle02010
ABC transporters
rle02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rle00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
RL3546 (oppD)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RL3546 (oppD)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
RL3546 (oppD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rle02000
]
RL3546 (oppD)
Transporters [BR:
rle02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Oligopeptide transporter
RL3546 (oppD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
AAA_21
SMC_N
AAA_29
DUF87
Motif
Other DBs
NCBI-ProteinID:
CAK09034
UniProt:
Q1MDE3
LinkDB
All DBs
Position
3724908..3725915
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AA seq
335 aa
AA seq
DB search
MSHETQKDTLLELKDYSITFKTPDGEVKAVSNMNLTVKRGERIAIVGESGSGKSQTFLGI
MGLLAKNGKTTGQALLEGKDVLSLKPRELDQIRGKDMAMVFQDPMTALNPSLKISRQLTE
QLEVHGGLTARAASAAALDMLKRVGIPDPTRRFHLYPHELSGGMRQRIVIAMALLTRPKL
LIADEPTTALDVTIQAQILDLFNDLTAEMNTALIMITHDLGVVAGLADRVAVMYAGRIVE
EAPVDELFDNPAHPYTAALHASIPRPDQDVDDLVVIPGRPPNLQHLPKGCNFSPRCSQVQ
DDCIDRPPLLEVLALHHCAACYHPFPRREELLNHG
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgtcccacgaaacacaaaaagacacccttctcgaactcaaagactactcgatcaccttc
aaaacgccggatggagaggtgaaggcggtctctaacatgaacctgacggtcaagcgcggc
gaacgcatcgccatcgttggcgagtccggttccggcaagagccagaccttcctcggtatc
atgggcctgctcgccaagaacggcaaaacgacgggacaggcgctgctcgaaggcaaggac
gtgctttcgctgaagccgcgcgagctcgaccagatccgcggcaaggacatggccatggtc
ttccaggacccgatgaccgccctcaatccctcgctgaagatctcccggcaactgacggaa
cagctcgaggtgcacggcgggctgacggcacgcgccgcatccgccgccgcgctcgacatg
ctcaaacgcgtcggcatccccgacccgacgcggcgcttccatctctacccccacgagctt
tccggcggcatgcgccagcgcatcgtcatcgccatggcgctgctcacccggccgaaactg
ttgatcgccgacgaaccgacgacggcactcgacgtcaccatccaggcgcagatcctcgat
cttttcaatgatctgacggcggagatgaacacggcgctgatcatgatcacccacgatctc
ggcgtcgtcgccggcctcgccgaccgtgtcgccgtcatgtatgccggccgcatcgtcgag
gaggcgccggtcgatgagctcttcgacaatccggcccatccctataccgcagcgctgcat
gcctcgatcccgcggccggaccaggatgtcgacgacctcgtcgtcatccctgggcgtccg
ccgaacctgcagcacctgccgaagggctgcaatttctcgccgcgctgttcccaggtccag
gacgattgcatcgaccgcccgccattgctcgaagtgctggcgctgcatcactgcgccgca
tgctaccaccccttcccgcgtcgcgaggaactgctgaaccatggctga
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