Rhizobium johnstonii: RL3571
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Entry
RL3571 CDS
T00402
Symbol
xdhB
Name
(GenBank) putative xanthine dehydrogenase
KO
K13482
xanthine dehydrogenase large subunit [EC:
1.17.1.4
]
Organism
rle
Rhizobium johnstonii
Pathway
rle00230
Purine metabolism
rle01100
Metabolic pathways
rle01120
Microbial metabolism in diverse environments
rle01232
Nucleotide metabolism
Module
rle_M00958
Adenine ribonucleotide degradation, AMP => Urate
rle_M00959
Guanine ribonucleotide degradation, GMP => Urate
Brite
KEGG Orthology (KO) [BR:
rle00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
RL3571 (xdhB)
Enzymes [BR:
rle01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.4 xanthine dehydrogenase
RL3571 (xdhB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MoCoBD_2
MoCoBD_1
Ald_Xan_dh_C
Motif
Other DBs
NCBI-ProteinID:
CAK09059
UniProt:
Q1MDB8
LinkDB
All DBs
Position
3752559..3754898
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AA seq
779 aa
AA seq
DB search
MDKSTFEDRKAIIAGPMHGSLRHDSAHKHVTGTADYIDDIPEPAGLLHGALGLSDRAHAE
ILGIDLSAVAAYPGVVWVFTGKDVPGVNDVSSNGSHDEPLLAETLVQFHGQPIFAVIAET
RDAARRAALLAKIDYRDLPHWSDIDGALANGSPLVITPMTLHRGEPETEMTNAAMHLKGQ
MRIGGQEHFYLEGHIAVAIPGEDDEVTVWSSTQHPSEIQHIVGHVLDIPSNAVTVNVRRM
GGGFGGKETQGNQFAALAAIAAKKLGRAIKFRPDRDEDMSATGKRHDFLVDYELGFDAEG
RIHAVDATYAARCGFSSDLSGPVTDRALFHADSSYFYPHVHLTSKPLKTHTVSNTAFRGF
GGPQGMLGAERFIEEIAYALGKDPLDVRKLNFYGQPGSERTLTPYHQEIEDNIIDRIVEE
LEETAEYRARRNAIIAFNRDSRYIRKGIALTPVKFGISFTMTAFNQAGALVHIYQDGSIH
LNHGGTEMGQGLYTKVAQVLADSFQVDIDRVKITATTTAKVPNTSATAASSGSDLNGMAA
YDAARQIKERLVAFAAEKWDVGPADVVFLPNRVRVGEIEIPFPDFIKQAYFARVQLSAAG
FYKTPKIHWDRKAGRGTPFYYFAYGASCTEVSIDTLTGEYLIDRTDILHDVGRSLNPAID
LGQVEGAFVQGLGWLTTEELWWDDKGRLRTHAPSTYKIPLASDRPKIFNVRLAEWSENTE
ATIGRSKAVGEPPFMLAISVLEALSMAVASVADYKVCPRLDAPATPERVLMAVERMKRV
NT seq
2340 nt
NT seq
+upstream
nt +downstream
nt
atggacaaatccaccttcgaagaccgcaaggccatcatcgccggcccgatgcacggctcg
ctgcggcatgattcagcgcataagcacgtcaccggaaccgccgattatatcgacgatatt
ccagaacccgcaggtctgctgcatggtgccctcggcctctccgaccgggcgcatgccgaa
atcctcggcatcgacctttccgcggtcgccgcctatcccggcgtcgtctgggttttcact
ggcaaggacgtgcccggggtcaacgacgtcagctccaacggcagccatgacgagccgcta
ctggccgaaactttagttcagttccacggccagccgatctttgccgtcatcgccgagacg
cgtgatgccgcccgccgcgccgcgctgctggcaaagatcgactatcgtgacctgccgcac
tggagcgatatcgacggcgcgctcgccaatggaagcccgctggtcatcaccccgatgacg
ctgcaccgcggcgagccggaaacggaaatgacgaatgccgccatgcatctgaaaggtcag
atgcgcatcggcggacaggagcatttctacctcgaaggccatatcgccgtggcgatccca
ggcgaggacgacgaggtcactgtctggtcttcgacacagcatccaagcgagatccagcac
atcgtcggccacgtgctcgatattccttcgaacgccgtgaccgtcaatgtgcgccgcatg
ggcggcggcttcggcggcaaggagacgcagggcaatcagttcgcagcacttgcggcgatc
gccgccaagaagctcggccgcgcgatcaaattccgccctgatcgcgacgaggatatgagc
gccaccggcaagcgccacgatttcctcgtcgattacgaactcggcttcgacgccgaaggc
cgcatccatgcggtcgacgctacctatgcggcgcgctgcggtttctcctccgacctctcg
ggaccggtgaccgaccgtgccctcttccatgccgattccagctatttctatccgcatgtg
catctgacctcgaagccgttgaagacgcacaccgtctccaacaccgccttccgcggtttc
ggcgggccgcagggcatgctcggcgccgaacgcttcatcgaggagatcgcctatgccctt
ggcaaggatccgctcgatgtccgcaaactgaatttctacggccagccgggttcggagcgc
acactcaccccctaccatcaggagattgaggacaatatcattgaccgcatcgtcgaggag
ctggaggaaacggccgaataccgggcgcggcgcaacgccatcatcgccttcaaccgcgac
agccgctacataagaaaaggcatcgccctgacgccggtgaaattcggcatctccttcacc
atgaccgccttcaaccaggcgggcgccctcgtccacatctaccaggacggctcgatccat
ctgaaccatggcggcaccgaaatgggccagggcctctataccaaggtggcgcaggtgctg
gccgacagcttccaggtcgatatcgacagggtgaagatcactgcgacgacgacggccaag
gtgcccaacacctcggccaccgccgcctcctccggctcggacttgaacggcatggccgcc
tacgacgccgcccgccagatcaaggaacggctggtcgcctttgccgccgagaaatgggat
gttggacccgccgacgtcgtcttcctgccgaaccgcgtgcgcgtcggcgagatcgagatc
cccttccccgatttcatcaagcaggcctatttcgcccgcgtccagctttccgccgccggc
ttctacaagacgccgaagatccactgggaccgcaaggccggccgcggcacgcccttctat
tatttcgcctacggcgcctcctgcaccgaggtttcgatcgacacgctgaccggcgaatat
ctgatcgaccgcaccgacatcctccacgatgtcggccgatcgctgaacccggcgatcgat
ttgggccaggtcgaaggcgccttcgtgcagggactgggctggctgacgacggaagaactc
tggtgggacgacaagggccggctgcgcacccatgctccctcgacctacaagatcccactc
gcctccgaccgcccgaagatcttcaacgtgcgccttgccgaatggtccgagaacactgag
gccaccatcggccgctccaaggccgtcggcgaaccacccttcatgctggcgatctcggtg
ctggaagcactgtcgatggcggtcgcgagtgtcgcggattacaaggtctgcccgaggctc
gacgctccggcgacgccggaacgggtgctgatggcggtcgagcggatgaagcgggtgtag
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