Rhizobium johnstonii: RL3840
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Entry
RL3840 CDS
T00402
Name
(GenBank) putative substrate-binding protein component of ABC transporter
KO
K10439
ribose transport system substrate-binding protein
Organism
rle
Rhizobium johnstonii
Pathway
rle02010
ABC transporters
rle02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
rle00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
RL3840
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
RL3840
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rle02000
]
RL3840
Transporters [BR:
rle02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Ribose transporter
RL3840
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
Motif
Other DBs
NCBI-ProteinID:
CAK09330
UniProt:
Q1MCK0
LinkDB
All DBs
Position
complement(4057660..4058646)
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AA seq
328 aa
AA seq
DB search
MRKALLLTAAVLALTAGQALAKKQLVIVVKGLDNPFFEAINQGCQKWNKENPTAEYECFY
TGPASTSDEAGEAQIVQDMLGKADTAAIAISPSNAKLIAQTLKTANPTVPVMTLDADLAA
EDAALRKTYLGTDNYLMGARIGEYIKKGKPKGGKICTIEGNPGADNILRRAQGMRDTLTG
QKGLTELKGEGGWTEVAGCPVFTNDDGAKGVQAMTDILAANPDLDAFGIMGGWPLFGAPQ
PYRDLFKPMADKIASNDFVIGAADTIGDEVAIAKEGLVTALVGQRPFEMGYKAPSVMMDL
IAGKPVEDPVFTGLDECTKDTVDTCIQK
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgaggaaggcattactacttacagccgcagttttagcactgaccgccgggcaagccttg
gccaagaagcaactcgtcatcgtcgtcaaaggcctcgacaatccgttcttcgaagcaatc
aatcaaggttgccagaaatggaacaaggagaaccccacggcggaatacgaatgcttctac
accggtccggcatcaacatccgatgaagccggcgaagcgcagatcgttcaggatatgttg
ggcaaggcagacacggctgcaatcgcaatctcgccgtcaaatgcaaagctcattgcccag
accctgaagaccgccaatccgacggttccggtgatgacgctcgatgccgatcttgcagcc
gaggacgcagcgttgcgcaagacctatctcggcaccgacaactatctgatgggcgcccgc
atcggcgaatacatcaagaagggcaagccgaagggcggcaagatctgcacgatcgaaggc
aatccgggagcggacaatattctacgccgcgcacaagggatgcgcgacacgcttactggc
cagaaaggcttgacagagctgaaaggcgagggtggctggaccgaggttgccggctgcccg
gtgttcaccaatgacgacggtgccaagggcgttcaggcaatgaccgatatcctcgcggcc
aatcccgacttggacgcattcggcattatgggcggctggccattgttcggtgcaccgcaa
ccctatcgcgacctgttcaagccgatggccgacaagatcgccagcaacgatttcgtcatt
ggtgccgccgacacgatcggcgacgaggtcgccattgcgaaggaaggactggtcacggcg
ctcgtcggccaacgaccgttcgagatgggctacaaggcaccgtcggtgatgatggatctg
attgccggcaagccggttgaagatccggtcttcaccggtctcgatgagtgcacgaaggat
acagtcgacacctgcatccaaaagtag
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