Rhizobium johnstonii: RL3850
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Entry
RL3850 CDS
T00402
Symbol
dgoD
Name
(GenBank) putative galactonate dehydratase
KO
K01684
galactonate dehydratase [EC:
4.2.1.6
]
Organism
rle
Rhizobium johnstonii
Pathway
rle00052
Galactose metabolism
rle01100
Metabolic pathways
rle01120
Microbial metabolism in diverse environments
Module
rle_M00552
D-galactonate degradation, De Ley-Doudoroff pathway, D-galactonate => glycerate-3P
Brite
KEGG Orthology (KO) [BR:
rle00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
RL3850 (dgoD)
Enzymes [BR:
rle01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.6 galactonate dehydratase
RL3850 (dgoD)
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Motif
Pfam:
MR_MLE_C
MR_MLE_N
Motif
Other DBs
NCBI-ProteinID:
CAK09340
UniProt:
Q1MCJ0
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All DBs
Position
4067672..4068817
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AA seq
381 aa
AA seq
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MDSVQRSTGQAILISDVVAHPLSQTLPKPTVTSWGTYHKVSMVLVEVRTDAGIVGVGEVL
ARFSPKAYAELIETSLKPRLIGQDASNIGALWQSMRRSLSGRAGGMLIEAIAGVDIALWD
VMGKAAGMPIAKLLGGIGRETIEVYAAAVNWVDDVEADRELERYIGEGFPRIKVKMANPV
REACRRIERLRKRAGDDIELCVDANWAYDLDQAIEVGRALSANGYFWFEEPLAPENEQGY
EELRKRCDVPLAAGESNFTADQAQRLVANRTLSILQPDVARAGGISETRRMADYAALHDV
GYAPHIGMSGIICETASAHLAAALPNFQVMECECDLSPFKRDLADLAPGCLRQKKGQLDV
PTRPGLGIEIDWDAVKRLRIQ
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atggattctgtgcaacgttcgaccggacaggcgatcctcatttcagatgtcgtcgcccat
ccgctcagccagacgctgcccaaaccgaccgtcacctcctggggcacctatcacaaggtc
tcgatggttctcgtcgaggtgcgcaccgatgccggcatcgtcggcgtcggtgaggtgctg
gcccggttttcgcccaaggcctatgcggaactgatcgaaacctcgttaaagccacggctg
atcggacaggacgcaagcaacatcggcgcgctctggcaatccatgcggcgctcgctgtca
ggccgcgccggcggcatgctgatcgaggcgatcgcaggggtcgacattgcgctatgggac
gtcatgggcaaggccgcgggcatgccgatcgccaagctgcttggcggcatcggccgggaa
acgatcgaggtctatgccgccgccgtaaactgggtcgacgatgttgaggccgatcgggaa
ctggagcgctatatcggcgagggattcccgcgcatcaaagtcaagatggccaatcccgtc
cgggaagcctgccggcgcatcgaacggctgcgcaagcgcgctggcgacgatatcgaactc
tgtgtcgacgccaactgggcctatgatctggaccaggcgatcgaagtcggcagggcactt
tcggccaacggctacttctggttcgaggaaccgctggcgccggaaaacgagcaaggctac
gaagaacttcgcaagcgctgcgacgtaccgctcgcagccggagagagcaactttaccgcc
gatcaggcgcaacgtcttgtcgccaaccgcaccctttcaatcctgcagccggatgtcgcc
cgtgccggcggcatatccgaaacacggcgcatggcagactatgccgccctgcatgatgtt
ggctacgccccgcatatcggcatgtccggcattatctgcgagacggccagcgcgcatctg
gcggccgcccttccgaatttccaggtgatggaatgcgaatgcgatcttagccccttcaag
cgcgacttggccgatctggcgcccggctgcctgcgccagaagaagggccagctcgacgta
ccgacacggccgggtctcggcatcgaaatcgattgggacgccgtcaaacggctccgcata
cagtga
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