Rhizobium johnstonii: RL3878
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Entry
RL3878 CDS
T00402
Name
(GenBank) putative solute-binding component of ABC transporter
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
rle
Rhizobium johnstonii
Pathway
rle02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rle00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RL3878
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rle02000
]
RL3878
Transporters [BR:
rle02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
RL3878
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_6
SBP_bac_11
SBP_bac_1
Motif
Other DBs
NCBI-ProteinID:
CAK09368
UniProt:
Q1MCG3
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All DBs
Position
4105440..4106462
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AA seq
340 aa
AA seq
DB search
MKKALIASAALAALCPLGAAAAERTLTISVYAFAQDDFKTLVYDPFEAKCGCKLVVETGN
SVERLAKMEANKANPVVDLAAVSMADALAASRTGLIDKIDTAKLADFAKLYDVAKDPNGD
GMSVGYTFYATSIAYRSDKMKIDSWADLLKPEYVGHVAFPNVTTNQGPPALYMLGLALGK
DTPDLKGPIEALGEKKDEIVTFYEKSSQLVQLMQQEEIWAAPIGRFSWAGFTKLDVPVAW
ATPKEGQTGGMNVLVLTKGSKNQDLALQFMDFWLSTEIQTKLAEKLIDSPANSEVKLSEA
AANNLTYGEETAKSLKLIPSAVALDNRAGWLKTWNEKVGQ
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaagctctcattgcctcggcagccctcgccgccctatgcccgctcggcgccgcc
gcggcagagcggacgctgacgatttccgtctatgcctttgcgcaggacgatttcaagacg
ctggtctacgatccgttcgaagccaaatgcggctgcaagctggtggtcgaaaccggcaac
agcgtcgagcgtctggccaagatggaggcgaacaaggccaaccccgtcgtcgatctcgcc
gccgtttccatggccgatgcgctggccgcgtcccgcaccggcctgatcgacaagatcgat
accgcgaagctcgccgatttcgccaagctctatgacgtcgccaaggatccgaacggcgac
ggcatgagcgtcggttacaccttctacgccacatcgattgcctatcgctccgacaagatg
aagatcgactcctgggccgatctattgaagccggaatatgtcggacacgtcgcctttccg
aacgtgaccaccaatcaaggcccgccggcgctctatatgctcggcctggcgctcggcaag
gacacgccggatctgaaggggccgatcgaagcgctgggcgagaagaaggacgagatcgtc
accttctacgaaaagtcctcgcagctggtgcagctgatgcagcaggaagagatctgggca
gcgccgatcggccgtttctcctgggccggcttcaccaagctcgacgtcccggtcgcctgg
gcaacgccgaaggagggccagaccggcggtatgaacgtgctggtcctgaccaagggctcg
aagaaccaggatctcgctctgcaattcatggacttctggctctcgaccgagatccagacc
aaactcgccgaaaagctgatcgacagcccggcaaacagcgaggtcaagctttccgaagcc
gccgccaacaacctgacctatggcgaggaaacggccaagagcctcaagctgatcccatcg
gccgtcgccctcgacaatcgcgccggctggctgaagacgtggaacgagaaggtcggccag
taa
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