Rhizobium johnstonii: RL3956
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Entry
RL3956 CDS
T00402
Name
(GenBank) putative site-specific DNA recombinase
Organism
rle
Rhizobium johnstonii
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Gene cluster
GFIT
Motif
Pfam:
Recombinase
Resolvase
Zn_ribbon_recom
HTH_38
HTH_62
MAT1
Motif
Other DBs
NCBI-ProteinID:
CAK09446
UniProt:
Q1MC85
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Position
4178908..4180509
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AA seq
533 aa
AA seq
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MKRAVIYARYSTDLQNDKSVEDQFSLCRDFAARLGADVVKQFSDRAKSGASMFGRPGLAD
MMTAAERGDFEILITESTDRVSRDIADLAHVHKVLKFRNIEMQCVNGGLMDTVQIGMYGI
VGQMQREEGARKVKRGMTGVVRSGRNPGGKAYGYRPIDGRKGELEIVEEEACIIRRIFDM
YAAGYSARLIAAALNKEGVPAPRGQQWNASTINGNGIRGNGILRNPLYVGQLVWNRVHMV
KDPSTGRRVSRPNERSAVETVDAGHLRIITDDLFQEVKVRKDERTGTQAHTHPKSKRLLS
GLLRCSACGGSLSTIGADRSGPRVQCSTNKESASCPNGARYYVEKIERDVVDRLRGMFAT
TTYIDAYVEEYKAESKRLATERRNSRGTKEAALVNVQEQIARVLEQVAKGTIDDDDVSSI
MAKLKAERSLLKAELAAQEPPTNVIEIKPKALTKFPEDVESLADILKERGAEPTMEMAKA
FREVISRIIVHPRKPGGAYNYEIKGWLSAITGPDLSSVLMVAEEGFEPPTQGL
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgcgcggtgatctacgctcgctactcgaccgatttgcaaaacgacaagtcggtc
gaggatcaattcagcctgtgccgcgacttcgcggcgcggctgggcgctgacgtggtaaaa
cagttctccgaccgggcgaagtcgggcgcgtcgatgttcggacggcccggccttgcggat
atgatgacggccgcggagcgcggcgatttcgaaattctaattaccgaatccaccgatcgt
gtgtcgcgcgatatcgccgacctggcgcatgtccacaaggtgctgaagtttcgcaacatc
gaaatgcaatgcgtcaacggcggcctcatggataccgttcagatcggtatgtacggcatt
gtcgggcaaatgcagcgagaggaaggtgctcgcaaggtaaagcgaggcatgacaggcgtt
gtgcgctctggtcgtaatcctgggggcaaggcttacggatatcgaccgatcgacgggcga
aagggcgaactggagattgtcgaggaagaagcttgcatcatccgcaggattttcgacatg
tatgcggcaggctacagcgctcgactgatcgcggcggcgctgaacaaagaaggcgtaccc
gctccgcgcggccagcagtggaatgcctcgacgatcaacgggaatggaattcgggggaac
ggtattctccgaaacccgctctatgtcggccagctcgtctggaaccgcgttcacatggtg
aaggacccttcgaccggcaggcgggtatcgcgcccgaatgagcgctcggctgtcgagacc
gtcgacgccggtcaccttcgaataatcaccgatgaccttttccaggaagtgaaagtgcgc
aaggacgagcgcaccggcactcaggctcacacacatccgaaaagtaaacgcttgctatct
ggccttctgcgatgctccgcgtgtggcggtagcctctcgacgatcggagctgaccgcagc
ggcccccgcgtccagtgtagcacgaacaaagaatcggcgagctgcccgaacggtgctcgc
tactatgtggaaaagatcgagcgcgacgtcgtcgaccggcttcgggggatgtttgcgacc
acaacctacatcgacgcctatgtcgaagaatacaaagccgagagcaagcgacttgccact
gagcgccgcaacagccgcgggacgaaggaagccgcactggtcaacgttcaggagcagatt
gcccgcgttttggaacaggtggctaaggggacgatcgatgatgacgatgtctcgtcgatc
atggccaagctcaaagccgagcgcagcctgctaaaagcagaacttgccgcacaggagccg
cccactaatgtgatcgaaatcaagccgaaggcattgacgaagtttccggaggatgtggaa
agcctggccgatatcctcaaggagcgaggggcagagccaacgatggagatggcaaaggct
ttcagggaggtgatttcgcggatcatcgttcacccgagaaaaccgggcggcgcctacaat
tacgagatcaaaggatggctgtctgcaatcaccggaccagacttgtcgtctgtcttgatg
gtagcggaggagggatttgaacccccgacacaaggattatga
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