Rhizobium johnstonii: RL3997
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Entry
RL3997 CDS
T00402
Name
(GenBank) putative transmembrane ion channel protein
KO
K22044
moderate conductance mechanosensitive channel
Organism
rle
Rhizobium johnstonii
Brite
KEGG Orthology (KO) [BR:
rle00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rle02000
]
RL3997
Transporters [BR:
rle02000
]
Other transporters
Pores ion channels [TC:
1
]
RL3997
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MS_channel_2nd
MS_channel_3rd
MS_channel_1st
Motif
Other DBs
NCBI-ProteinID:
CAK09487
UniProt:
Q1MC45
LinkDB
All DBs
Position
complement(4223410..4225626)
Genome browser
AA seq
738 aa
AA seq
DB search
MIFVSILLAGGSGRGYRCCRKTLALHRRSATHRRTAMKRGMAGISRIVLFCIVALSALSS
AVSPGVAQTPPAAPVTAGPPAEVRQMMELMQTPQVKQWMSTQMTAAPASDAAAGDQISVL
SGLLQHARRHVSMVSDAAMMLPSQVGHASSLFFGEIAAAGWPRMVAQFLAIFLLGTIVER
IARYAFRRRRQAAQMAGMHLAPRVIPALIFAMATALALLSVSWPPVSQSIAIVCVVALVV
QRFTICLGGVLVDLIGLARVEEERQGNTAAIMPVPAVAFFWYRRCATFVIYFIFGWAVIQ
SMEPLRYSSSVRLLVGYILGIGLLLIAIEAVWSRPHKDEKRGHGTSWSLTVYFLLLWSLW
VAGFNWLLWLGIYVLLLPRVLAVSTIAVKSLQQTEASFLATRRIAAVLLDRGVRALIIAV
AAIWLGHMLGVGADTMAAGETMIDKIARGVIGGIVILLAADLLWHVIKAYIDGKLFESSV
DGGATDEEKAKRARIQTLLPIFRNILAVVIAVIAVLMVLSGLGIEIGPLIAGAGVVGVAV
GFGAQTIVKDVISGMFYLWDDAFRIGEYIESGSHKGVVEAFSLRSVKLRHHRGPLTTVPF
GELGAVKNLNRDWTIDKISLNVKYDTDLVKAKKVIKQIGQTLLENPEFGPHIIETLKMKG
VEQFGEFAIEIRLSMMTKPGEQFVIRRNALAMIRNAFQENGIEFAVPTVQVAGDRDAEVD
AAVARYAAHARASAEPAA
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
atgatcttcgtctccatcctccttgctggcggcagcggtcgaggctatcgatgctgtcga
aagacgttggccttgcatcggcggtcggcgacccatcggaggacggcaatgaagcgtggc
atggcagggatctccaggatcgtcctattctgcatagtggcgctgtcggcgctttcttcg
gcagtctcgccgggtgtcgcgcagaccccgccagccgctcctgttacagcaggtccgccg
gccgaggtgcgtcagatgatggagctgatgcagacgcctcaggtcaaacaatggatgtcg
acgcagatgacggcggcacctgcgagcgatgcggcggccggtgaccagatttcggtgctc
tcaggtctgctccagcatgcccgccggcacgtctcgatggtctccgatgcggcgatgatg
ctgccctcgcaggtcggccatgcttcttcgctgtttttcggcgagatcgccgccgccggc
tggccgcgcatggtggcgcagtttctggcgattttcctgcttggcaccatcgtcgagcgc
attgcccgttatgcctttcgccgccgccgccaggcggcgcagatggcgggcatgcatctc
gccccgcgcgtcatcccggcgctgatcttcgccatggcgacggcgcttgctcttctcagc
gtcagctggccgccggtcagccagagcatcgcgatcgtttgcgttgtcgcgctcgtggtc
cagcgcttcacgatttgcctcggcggcgtgctggtcgatctcatcgggctggcgcgggtg
gaggaagaacggcagggtaacaccgctgcgatcatgccggtgccggcggttgcattcttc
tggtaccggcgctgtgcaaccttcgtcatctatttcattttcggctgggcggtgatccag
tcgatggagccgctccgttattcctcaagcgtgcggctcctcgtcggctatattctcggc
atcggcctgttgctgattgcgatcgaggcggtctggtctcggccgcacaaggacgagaag
cgcggtcacgggacatcctggtcgctcaccgtctatttcctcttgctctggagcctttgg
gtcgcaggcttcaactggctgctctggctcggcatttacgtgctgctgctgccgcgcgtg
cttgccgtctcgacgattgcggtaaaatcgttgcagcagaccgaagcgagcttccttgcc
acgcgccgcattgcagccgtgctgctcgaccgcggcgtgcgggcgctgatcattgccgtt
gccgccatctggcttgggcatatgctcggcgtcggcgccgatacgatggccgccggcgaa
acgatgatcgacaagatcgcgcgcggcgtgatcggcggcatcgtcatcctgcttgccgcc
gatctgctctggcacgtcatcaaggcctatatcgacggcaagctgttcgaatcatccgtg
gatggcggagcaacggatgaggagaaggccaaacgcgcgcggatacagacgctgttgccg
atcttccgcaatatccttgccgtcgtcattgccgtcatcgccgttctgatggtgctctcc
ggcctcggtatcgaaatcgggccgctgatcgccggcgccggcgtcgtcggcgtcgcggtc
ggtttcggcgcgcagacgatcgtcaaggacgtcatcagcggcatgttctatctctgggac
gatgcctttcgcatcggcgaatatatcgaaagcggcagccacaagggcgtggtcgaggcc
ttcagcctgcgctcggtcaagctcaggcaccatcgcgggccgctgacgacggtgccgttc
ggcgaactcggcgccgtgaagaacctcaatcgcgactggacgatcgacaagatcagcctc
aacgtcaaatacgacaccgatctcgtcaaggcgaagaaggtgatcaagcagatcggccag
acgctgctcgaaaatccggaattcggccctcatatcatcgagacgctgaagatgaagggt
gtcgagcagttcggcgaattcgccatcgaaatccggctgtcgatgatgacgaagcccggc
gagcaattcgtcatccgccgcaatgcgctggcgatgatccgcaatgccttccaggaaaac
ggtatcgaattcgccgtgccgacggtgcaagtagcgggcgaccgcgacgcggaggtggat
gctgccgtcgcgcgctatgccgcgcatgcgcgggcgagcgccgagccggcggcatga
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