Rhizobium johnstonii: RL4156
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Entry
RL4156 CDS
T00402
Name
(GenBank) putative lysine/ornithine decarboxylase
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
rle
Rhizobium johnstonii
Pathway
rle00330
Arginine and proline metabolism
rle00480
Glutathione metabolism
rle01100
Metabolic pathways
rle01110
Biosynthesis of secondary metabolites
rle04148
Efferocytosis
Module
rle_M00134
Polyamine biosynthesis, arginine => ornithine => putrescine
Brite
KEGG Orthology (KO) [BR:
rle00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
RL4156
09106 Metabolism of other amino acids
00480 Glutathione metabolism
RL4156
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
RL4156
Enzymes [BR:
rle01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
RL4156
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
CAK09645
UniProt:
Q1MBN8
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All DBs
Position
complement(4403850..4404983)
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AA seq
377 aa
AA seq
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MTTQRIRDFLATRRPDGPCLVVDLDVVRDNFDAFRHAMPDSAIYYAVKANPAPEVLKLLA
GLGSNFDCASVAEIEMALEAGATAARISYGNTIKKERDVARAHALGVSLFAVDSHEEVEK
ISRAAPGARVFCRVLTDGEGAEWPLSRKFGCVPQMAVDVLVYAHQLGLQSYGVSFHVGSQ
MTKVDAWDSALADAKRVFVSLAKQGIHLQMVNMGGGFPTKYLRDVPSAEAYGKSIYQALR
THFGNQIPQTIIEPGRGMVGNAGVIKAEVVLISKKSDNDDARWVFLDIGKFGGLAETMDE
AIRYPIRTEHDGDEMEPCVIAGPTCDSADVLYEKNLYPLPISLSIGDEVLIEGTGAYTTT
YSAVAFNGFDPLKAYII
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atgaccacccagcgcatccgcgactttctcgcaacccgacgtcccgacggtccctgcctc
gtggttgacctcgacgtcgttcgcgacaatttcgacgccttccgtcacgccatgccggac
agcgccatctattacgccgtcaaggccaacccggctcccgaagtgctgaagctgctcgca
ggcctcggctccaatttcgattgcgcatccgttgccgaaatcgaaatggcgctcgaagcc
ggtgcgaccgctgcccgcatctcctacggcaacacgatcaagaaggaacgtgacgttgcc
cgcgcgcatgcgctcggcgtcagcctctttgcggtcgatagccatgaggaagtcgagaag
atctcgcgcgccgctcccggcgcccgtgtcttctgccgcgtgctcacggatggcgaaggc
gccgaatggccgctgtcgcgcaagttcggctgcgttccgcagatggctgtcgacgttctc
gtctacgcccatcagcttggcctgcagtcctatggcgtttcgttccatgtcggttcgcag
atgaccaaggtggatgcttgggattcggcgctcgccgatgccaagcgcgtcttcgtatcg
cttgccaagcagggcatccacctgcagatggtcaacatgggcggcggcttcccgaccaag
tacctgcgtgacgttccgtccgcagaagcttacggcaagtcgatctaccaggcgctgcgc
acgcatttcggcaaccagatcccgcagacgatcatcgagccgggccgcggcatggtcggc
aatgccggtgtcatcaaggcggaagtcgtgctgatttcgaagaagtcggacaatgacgat
gcccgctgggtcttcctcgacatcggcaagttcggcggtctcgccgagacgatggacgaa
gccatccgctatccgatccgcacggaacacgacggcgacgagatggagccctgcgtcatt
gccggtccgacctgcgattcggccgacgtgctctacgagaagaacctctatccgctgccg
atctccctttcgatcggcgacgaggtcctgatcgaaggcaccggcgcctatacgacgacc
tattcggcggtcgctttcaacggtttcgacccattgaaggcctacatcatctaa
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