Rhizobium johnstonii: RL4172
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Entry
RL4172 CDS
T00402
Name
(GenBank) putative solute-binding component of ABC transporter
KO
K10439
ribose transport system substrate-binding protein
Organism
rle
Rhizobium johnstonii
Pathway
rle02010
ABC transporters
rle02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
rle00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
RL4172
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
RL4172
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rle02000
]
RL4172
Transporters [BR:
rle02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Ribose transporter
RL4172
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
Bmp
OxoGdeHyase_C
Peripla_BP_3
Motif
Other DBs
NCBI-ProteinID:
CAK09661
UniProt:
Q1MBM2
LinkDB
All DBs
Position
complement(4421224..4422171)
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AA seq
315 aa
AA seq
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MRKLMLGLAVAAVTFAGAAHAQDKKFTIGVSIPAADHGWTSGVVFHAERVAKLLMAEHPG
LNVIVKTSPDAASQANAVQDLDTQGIDALVILPSDPDPLVNAIKEVKAKGKFVALVDRAP
SNNDNSVRDLYVAGNNPALGEVAGKYIKDTTPDAEVVIIRGLPIPIDQQRQDGFDKGIAG
SNVKVLDRQYGNWNRDDAFKVMQDYLTKYQKIDVVWCQDDDMAVGVLQAIEQAKRTDIKY
VVAGAGSKDMVKKVMDGDKLIPVDVLYPPAMVGTAMELTAAALYDQVPVHGSYILDATLV
TKENAKDFYFPDSPF
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgcgtaaattgatgttgggcctggcggttgcggcggtgacgttcgccggcgccgctcac
gcccaggacaaaaaattcacgatcggcgtatccattccggccgccgaccacggttggacg
tcgggcgtggtgttccatgccgaacgcgtcgccaagctgctgatggccgaacatcccggt
ctcaatgtcatcgtcaagacctcgccggacgccgctagccaggccaacgccgtgcaggat
ctcgatacgcagggcatcgacgccctcgtcatcctgccgtcggatccggatccgctcgtc
aacgccatcaaggaagtcaaggccaagggcaagttcgtcgccctcgtcgaccgcgcgccg
agcaacaacgacaattccgtgcgcgacctctatgtcgccggcaacaacccggctctcggc
gaagtcgccggcaagtacatcaaggacaccacgccggacgcggaagtggtcatcatccgc
ggtctgccgatcccgatcgaccagcagcgccaggacggcttcgacaagggcattgccggc
tcgaacgtcaaggttctcgaccgccagtacggcaactggaaccgcgacgatgcattcaag
gtcatgcaggactacctgaccaagtaccagaagatcgacgtcgtatggtgccaggatgac
gacatggccgtcggcgttctgcaggcgatcgagcaggccaagcgcaccgacatcaagtat
gtcgtcgccggcgccggttccaaggacatggtcaagaaggtcatggacggcgacaagctg
atcccggtcgacgttctctatccgccggcaatggtcggcacggcgatggagctgacggcg
gcagcactttacgatcaggttccggttcatggcagctacattctcgatgcgacgctcgtc
accaaggagaatgccaaggacttctatttcccggattcgccgttctga
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