Rhizobium johnstonii: RL4175
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Entry
RL4175 CDS
T00402
Name
(GenBank) putative LacI family transcriptional regulator
KO
K05499
LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG
Organism
rle
Rhizobium johnstonii
Brite
KEGG Orthology (KO) [BR:
rle00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rle03000
]
RL4175
Transcription factors [BR:
rle03000
]
Prokaryotic type
Helix-turn-helix
LacI family
RL4175
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Ortholog
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GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
LacI
Peripla_BP_4
Motif
Other DBs
NCBI-ProteinID:
CAK09664
UniProt:
Q1MBL9
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All DBs
Position
4425065..4426096
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AA seq
343 aa
AA seq
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MSNSTPATIEDVARIAEVSIATVSRAIHMPEKVANSTRLKVNQAIAITGYTTNAMARSLR
LGRSNMILVVAPDIGDPNFSNILVGLENEARAHGYGILIGHTQNDAQRGLEYLKFLNSNQ
AAGLILFTGILPFGHQTMTARLPPSVGVFEPVFNGGIPYVGVDDTEGARKAVDLLLAEGH
RKIAFIGDSRTRLAYTRRRMGYDAGLDAAGIPPDTRIVLEGDGTIESGRHAVEQLFMRDT
LPTAFMCVNDQTAIGVMVGLGARGYDIPRDFSVTGFDDVPQAVFISPPLTTIRQPRTAIG
KQAMALLLELLSDGRPTETEILLRPDLVVRNSVSAPSRNWSKR
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
gtgtcgaattccacgcccgcaaccatcgaagacgtcgcccggatcgccgaggtctccatc
gcgacggtttcccgggcaatccacatgccggagaaggtcgccaactccacccgcctcaag
gtcaaccaggcgatcgccatcaccggctatacgaccaatgccatggcgcgcagcctgagg
ctcggccgctccaacatgatccttgtcgtggcgcccgatattggcgatcccaatttttcc
aacattctcgtcgggctggagaacgaagcgcgcgcgcacggctacggcatcctgatcggc
cacacgcagaacgatgcgcagcgcggcctggaatatctgaaattcttaaattccaaccag
gcggccggattgatcctcttcaccggcatcctgcccttcgggcatcagacgatgaccgcg
cggctgccgccgagcgtcggcgttttcgaacccgtcttcaacggcggcattccctatgtc
ggcgtcgacgacaccgagggcgcgcgaaaggcagtagacctgctgctggctgaagggcat
cgcaagatcgccttcatcggcgattcacgcacccggcttgcctatacgagacgccgcatg
ggttacgatgccggtctcgatgccgcaggcatcccgcccgacaccaggatcgtgctggaa
ggcgacggcacgatcgaaagcgggcggcatgcggtcgaacagcttttcatgcgcgacacg
cttccaaccgccttcatgtgcgtcaacgaccagacggcgatcggcgtcatggtcgggctc
ggcgcgcgaggctatgatattccgcgggatttctcggtgaccggtttcgacgacgtgccg
caggccgtcttcatatccccaccgctgaccacgatccgccagccgagaacggcgatcggc
aagcaggcgatggcgctgctgctggaacttctgtccgatggccggccgaccgaaacggaa
atcttgctgcggccggatctggtggttcgaaactccgtctcggcgccgtcgcgcaactgg
tcgaaacgttga
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