Rhizobium johnstonii: RL4222
Help
Entry
RL4222 CDS
T00402
Symbol
exoI
Name
(GenBank) putative beta-hexosaminidase
KO
K12373
hexosaminidase [EC:
3.2.1.52
]
Organism
rle
Rhizobium johnstonii
Pathway
rle00511
Other glycan degradation
rle00520
Amino sugar and nucleotide sugar metabolism
rle00600
Sphingolipid metabolism
rle01100
Metabolic pathways
rle04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
rle00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
RL4222 (exoI)
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
RL4222 (exoI)
00511 Other glycan degradation
RL4222 (exoI)
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
RL4222 (exoI)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
rle03110
]
RL4222 (exoI)
Enzymes [BR:
rle01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.52 beta-N-acetylhexosaminidase
RL4222 (exoI)
Chaperones and folding catalysts [BR:
rle03110
]
Intramolecular chaperones
Others
RL4222 (exoI)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_20
Glyco_hydro_20b
Motif
Other DBs
NCBI-ProteinID:
CAK09711
UniProt:
Q1MBH2
LinkDB
All DBs
Position
complement(4473177..4475087)
Genome browser
AA seq
636 aa
AA seq
DB search
MADYLLEASWSPIEGSFGRLTFTLFNLSTEPLSGFSLAYTSETRVADKHVCDGGSLKRQV
AHFHEFLPPEGLSVPPGGRWRFTVEGLTRAPKHMTSGVKSAYLTLGDGRHVSVGFGDLML
EGRDGGVAPPILPPGRAEEPYSLLPWPLALGLKAGELPVVLYPAEPTRPDAVKALSLVLE
LYQRLYPADNVPFSLSAVEGGRAIRFVIESSIAAFAYELRFTAHEIMLSSADAAGRHYGL
ISLAQLLHGARADRERFKFPSFGTIADQPRYDWRGCHLDVSRQFYPVADVVRLIDILAWN
KLNIFHWHLADDEAWRLEIKAYPALTEIGARRGPDEVLVPQLGDGAQTRSGHYTQQDARR
IVAHAASLHIEVVPEIDIPGHSMATLFSLPELVDGQEAPDSYRSVQGYPNNALNPAVEFT
YEFLGKVFDEMVTLFPGEYLHIGGDEVAHGSWLSSPLCKALMEREKLTGTAELQSYFLKR
IKAMLSERGKKLVGWNEVSHGGGVDRDGTLLMAWEKPEVGIELAQQGYDVVMTPGQAYYL
DMAQAEAWAEPGASWAGHAPPEHTYAYEAEGELPEVLREKMRGIQACIWTENFLSRAYFN
RLVFPRLPAVAEAAWTPSARKDWDRFAAIVRMWPVL
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
atggccgattaccttctggaagcaagctggagcccgatcgagggcagtttcgggcgcctc
accttcacgcttttcaatctttcgaccgagccgctgtccggcttctcgctcgcctatacg
tcggagacgcgggttgccgacaaacatgtctgtgacggcggcagcctcaagcggcaggtc
gcgcatttccatgaattcctgccgcccgaggggctgagcgtgccgcccggcgggcgctgg
cggttcacggtcgagggactgaccagggcgccgaaacatatgacatcaggcgtcaagtcg
gcctatctgacacttggcgacgggcgccacgtttctgttggtttcggcgatctcatgctc
gaaggccgggatggtggcgtggcgccgcccattctgccgccgggccgggccgaggaaccc
tattcgctgctgccctggccgctggcgctcgggctgaaggcgggagagctgccggtcgtc
ctttatccggccgagccgacgcggcccgatgcggtcaaggcgctctcgctggttctggag
ctctatcagcggctctatccggccgacaatgtgccgttttccctcagtgccgtcgaaggc
gggcgggccattcgtttcgtcatcgaatcgtcgatcgccgccttcgcttacgaattgcgt
tttacggcgcatgagatcatgctttcgagtgccgatgccgccgggcggcactacgggctg
atcagcctggcgcaattgctgcacggcgctcgcgccgatcgcgagcgcttcaaattcccc
agtttcggcacgatcgccgaccagccgcgttatgactggcgcggctgccatctcgatgtg
tccaggcagttttatccggtggcggacgtcgtgcggctgattgatattctcgcctggaac
aagctcaacatcttccactggcatctggccgatgacgaagcgtggcggctggagatcaag
gcctatccggcgctgacggagatcggcgcccggcgtgggccggatgaagtgctcgtgccg
cagctcggcgacggggcgcaaacgcgctccggccattacacacagcaggacgccaggcgg
atcgttgcgcatgcagcctcgttgcatatcgaagtggtgccggaaatcgatattcccggc
catagcatggcgacactgttctcactgcccgagctcgtcgacggccaggaggcgccggac
agttaccgctcggtgcagggttatccgaacaacgccctcaatccggcggtggaattcacc
tatgaatttctcggcaaggtgttcgacgaaatggtgacgctgtttcccggcgaatatctc
catatcggcggcgacgaagtggcgcatggctcctggctttcctcgccgctttgcaaggca
ctgatggagagggagaaacttaccggcaccgccgagctgcaatcctatttcctgaagcgt
atcaaagccatgctgtccgagcgcggcaagaaactcgtcggttggaacgaggtctcgcat
gggggcggggtcgatcgcgacggcacgctgctgatggcctgggaaaagcccgaggtcggt
atcgagctcgcacagcaaggttacgacgtggtgatgacaccggggcaagcctattatctc
gacatggcgcaggcggaggcctgggccgagccgggcgccagctgggcgggccacgcaccg
ccggaacatacctacgcttacgaggccgagggcgagctgccggaagtgctaagggagaag
atgcgcggtatccaggcctgcatctggaccgagaacttcctctcgcgcgcctatttcaac
cggctggtttttccgcgcctcccggccgtcgccgaagccgcctggacgccttctgcgcgc
aaggactgggatcgcttcgcagcgatcgtgcgaatgtggccggtgctttaa
DBGET
integrated database retrieval system
