Rhizobium johnstonii: RL4312
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Entry
RL4312 CDS
T00402
Name
(GenBank) putative DNA-3-methyladenine glycosylase
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
rle
Rhizobium johnstonii
Pathway
rle03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rle00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
RL4312
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rle03400
]
RL4312
Enzymes [BR:
rle01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
RL4312
DNA repair and recombination proteins [BR:
rle03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
RL4312
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
Motif
Other DBs
NCBI-ProteinID:
CAK09800
UniProt:
Q1MB83
LinkDB
All DBs
Position
complement(4583915..4584592)
Genome browser
AA seq
225 aa
AA seq
DB search
MDSAFEPLRGKVQIIRNEDDVRQGLEALLRLDPRLAPIVAEAGVIPLRLREPGFAGLAHI
IVSQMVSRASAEAIWRRMLPADGSLTAEGYALLHAEAWREFGLSRAKAETLSRIAEAVTS
GRLDLSGLCLKPPGEALGELTALKGVGPWTAEVYLMFCGGHADVFPAGDVALQNAVGTAF
GLAARPQAKTLAELSAVWSPWRSVAARLFWAYYATKMRRDMVPIG
NT seq
678 nt
NT seq
+upstream
nt +downstream
nt
atggattcggcttttgaaccactgcgaggcaaagtgcagatcatccgcaacgaagacgat
gtcaggcaggggctcgaagcgctgcttcgcctcgatccgcgtcttgcgccgatcgtcgcg
gaggccggggtcattccgctcaggctgcgcgaacccggttttgccggtcttgcccatatc
atcgtatcgcagatggtgtcgcgcgccagcgccgaggcgatctggcggcgcatgctgccg
gcggacggttcgctgacggccgaaggttacgcactgcttcacgccgaggcgtggcgcgaa
ttcggtctgtcgcgcgccaaggccgagacgctgtcgcggattgccgaagcggtcacctcc
ggccgtctcgatctctccgggctctgcctgaagccgccgggcgaggcgcttggcgaactc
accgcgctgaagggtgtcgggccgtggacggcagaggtctatctgatgttttgcggcggc
catgccgatgttttcccggccggcgatgtcgcgctgcagaatgccgtcgggaccgcattc
ggtcttgccgcacggccgcaggcgaagacgcttgctgagctttcggcagtctggtcgccg
tggcgctcggtagcggcacggcttttctgggcctactacgccaccaagatgcgccgtgac
atggtgccgatcggctga
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