Rhizobium johnstonii: RL4391
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Entry
RL4391 CDS
T00402
Symbol
fdsA
Name
(GenBank) putative NAD-dependent formate dehydrogenase alpha subunit
KO
K00123
formate dehydrogenase major subunit [EC:
1.17.1.9
]
Organism
rle
Rhizobium johnstonii
Pathway
rle00630
Glyoxylate and dicarboxylate metabolism
rle00680
Methane metabolism
rle01100
Metabolic pathways
rle01120
Microbial metabolism in diverse environments
rle01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
rle00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
RL4391 (fdsA)
09102 Energy metabolism
00680 Methane metabolism
RL4391 (fdsA)
Enzymes [BR:
rle01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.9 formate dehydrogenase
RL4391 (fdsA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Molybdopterin
Molydop_binding
Fer2_4
NADH-G_4Fe-4S_3
Molybdop_Fe4S4
Fer4_7
Fer4
Fer4_Nqo3
Fer4_21
Fer4_6
Fer4_10
Fer4_2
Fer4_9
Fer4_15
Fer4_16
Fer4_4
TPP_enzyme_M
Fer4_13
Motif
Other DBs
NCBI-ProteinID:
CAK09878
UniProt:
Q1MB07
LinkDB
All DBs
Position
complement(4669208..4672087)
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AA seq
959 aa
AA seq
DB search
MSLIHEIDYGTPASKSEAMVTLTIDGQQISVPEGTSIMRASMEAGIKVPKLCATDMVDAF
GSCRLCLVEIEGRNGTPSSCTTPVAANMVVHTQTGRLKDIRRGVMELYISDHPLDCLTCA
ANGDCELQDMAGAVGLRDVRYGYEGDNHVKARSNGDINLKWMPKDESNPYFTYDPSKCIV
CSRCVRACEEVQGTFALTIEGRGFGSRVSPGMHEHFIDSECVSCGACVQACPTATLTEKS
VIQIGQPEHSAVTTCAYCGVGCSFKAEMRGEELVRMVPWKDGQANRGHSCVKGRFAYGYS
THKDRILNPMIREKVSDPWREVSWDEAFAHVATEFRRIQYQYGREAIGGITSSRCTNEET
YLVQKLIRAGFGNNNVDTCARVCHSPTGYGLGQTFGTSAGTQDFDSVEHSDVVIVIGANP
TDGHPVFGSRLKKRLRQGAKLIVIDPRRTDIVRSPHIEASYHLPLKPGTNVAVMTALAHV
IVTEGLFDETFIRERCDWSEFEDWAAFVAEPQHSPEETEIFTGVPAADLRGAARLYAKGG
NGAIYYGLGVTEHSQGSTTVIAIANLAMATGNIGRPGVGVNPLRGQNNVQGSCDMGSFPH
ELPGYRHISDDATRDIFEKLWGVKLNNEPGLRIPNMLDAAVDGSFKGIYIQGEDILQSDP
DTKHVAAGLAAMECVVVHDLFLNETANYAHVFLPGSTFLEKDGTFTNAERRINRVRKVMS
PRNGYGDWEVTQKLAQAMGLDWNYSHPSEIMDEIAATTPSFAMVSYDYLEKMGSVQWPCN
EKNPLGSPIMHVNGFVRGKGKFIRTEYVATDERTSPRFPLLLTTGRILSQYNVGAQTRRT
ENVVWHAEDRLEIHPHDAEQRGVRDGDWVKLGSRSGDTTLRALITDRVAPGVVYTTFHHP
TTQANVITTDFSDWATNCPEYKVTAVQISPSNGPSEWQLEYDEQARQSRRIAGKLEAAE
NT seq
2880 nt
NT seq
+upstream
nt +downstream
nt
atgtctctcatccatgaaatcgactatggcactcccgcttcgaaatccgaggccatggtg
acgctcaccatcgacggacagcagatcagcgtgccggagggcacctcgatcatgcgcgcc
tcgatggaggccggtatcaaggtgccgaagctctgtgccaccgatatggtcgatgctttc
ggctcctgccggctctgcctcgtcgagatcgagggccgcaacggcacgccctcctcctgc
acgacgccggtggcggcaaacatggtggtgcacacgcagacggggcggttgaaggatatc
cgccgcggcgtgatggaactctatatttccgaccatccgctcgactgtctcacctgcgcg
gccaacggcgattgcgagttgcaggacatggcaggcgccgtcggcctgcgcgacgtgcgc
tacggctatgagggagacaaccacgtcaaggcgcgcagcaatggcgacatcaatctgaaa
tggatgccgaaggacgaatccaatccctatttcacctatgatccctccaagtgcatcgtc
tgttcgcgctgcgtgcgcgcctgcgaagaagtacagggaaccttcgcgctgacgatcgag
gggcgcggcttcggctcgcgcgtttcgcccggcatgcacgagcatttcatcgattccgaa
tgcgtctcctgcggtgcctgtgtccaggcctgcccgacggcgacgctgacggagaagtcg
gtgatccagatcggccagccggagcattcggctgtcaccacctgcgcctattgcggcgtc
ggctgttccttcaaggcggagatgcgcggcgaggaactggtgcgcatggtgccgtggaag
gacggtcaggccaatcgcggccattcctgcgtcaagggccgcttcgcctatggctattcc
acccataaggaccgcatcctcaatccgatgatccgcgaaaaggtcagcgatccctggcgg
gaagtgagctgggacgaggccttcgcacatgtggcgacggaattccgccgcatccagtat
caatacggccgcgaggcgatcggcggcatcacctcgtcgcgctgcaccaacgaggaaact
tatctggtgcagaagctgatccgcgccggcttcggcaacaacaatgtcgatacctgcgcc
cgcgtctgccattcgccgaccggctacggcctcggccagaccttcggcacgtcggcgggc
acgcaggatttcgacagcgtcgagcattccgacgtcgtcatcgtcatcggcgccaatcca
accgatgggcatccggtgttcggctcgcggctgaagaagcggctgcgccagggcgccaag
ctcatcgtcatcgatccgcgccgtaccgatattgtccgctcgccgcatatcgaggcctcc
tatcacctgccgctgaagcccggcaccaatgtcgcagtcatgacggcgttggcgcatgtg
atcgtcaccgaagggctctttgacgagacgttcatccgcgagcgctgcgactggtcggag
ttcgaggactgggcggccttcgtcgccgaaccgcagcacagtcccgaagagaccgagatc
ttcaccggcgtgccggcggcggatctgcgcggcgcggcaaggctctatgccaagggcggc
aatggcgcgatctactacggcctcggcgtcaccgaacacagccagggctcgaccacggtc
atcgcgatcgccaatctggcgatggcgaccggcaatatcggccgtcccggcgtcggcgtg
aacccgctgcgcggccagaacaatgtgcagggctcctgcgacatgggttccttcccgcac
gaactgccgggctaccggcacatttccgacgatgcgacgcgcgatatcttcgaaaagctc
tggggcgtgaagctcaacaacgagccgggcctgcgtattccgaacatgctggatgcagca
gtcgacggctcattcaaaggcatctacatccagggcgaagacatcctccagtccgatccc
gataccaaacatgtcgcggccgggcttgcggcgatggaatgcgtcgtcgtgcatgatctg
ttcctcaacgagaccgccaattacgcccatgtcttcctgccgggctcgaccttcctcgag
aaggacggcaccttcaccaatgccgagcgccgcatcaaccgcgtgcgcaaggtgatgtcg
ccgcgcaacggttatggcgactgggaagtgacgcagaagcttgcccaggcgatggggctc
gactggaattacagccatccgtcggagatcatggacgagatcgccgcaacgacgccgagt
ttcgcgatggtctcctacgactatctcgaaaaaatgggctcggtgcagtggccctgcaac
gagaagaacccgctcggctcgccgatcatgcatgtcaatggcttcgtgcgcggcaagggc
aagttcatccgcaccgaatatgtggcgaccgacgagcgcaccagtccgcgcttcccgctg
ctgctgacaaccggccgcatcctcagccagtacaatgtcggggcgcagacacggcgaacc
gagaatgtcgtctggcatgcggaagaccggctggaaatccatccgcatgatgccgagcag
cgcggcgttcgcgatggcgactgggtgaagctcggcagccgctccggcgacacgacgctc
agggcgctgatcaccgatcgcgtcgcgccgggtgtcgtctatacgaccttccatcatccc
acgacgcaggcgaacgtcatcaccaccgatttctccgactgggcgacgaactgcccggaa
tacaaggtgacggcggtgcagatctcgccctccaacgggccgagcgaatggcaactcgaa
tatgacgagcaggcgcggcaatcgcgccgcatcgccggcaagctcgaggctgcggagtga
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