Rhizobium johnstonii: RL4412
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Entry
RL4412 CDS
T00402
Symbol
priA
Name
(GenBank) putative primosomal protein N' (replication factor y)
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
rle
Rhizobium johnstonii
Pathway
rle03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rle00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
RL4412 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rle03400
]
RL4412 (priA)
Enzymes [BR:
rle01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
RL4412 (priA)
DNA repair and recombination proteins [BR:
rle03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
RL4412 (priA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
PriA_C
ResIII
Zn_ribbon_PriA
Helicase_C
Zn_ribbon_6
AAA_30
AAA_22
Zn_ribbon_Com
Motif
Other DBs
NCBI-ProteinID:
CAK09898
UniProt:
Q1MAY7
LinkDB
All DBs
Position
complement(4690057..4692273)
Genome browser
AA seq
738 aa
AA seq
DB search
MSTDSSDLFGALFEAPPANRTVPVLVPMPAPKPYSYSVPDGMAVEPGSVVQVPLGPRQVI
GVVWDSGEDGVDPKKLRPISHVFDCPPLAREMRDFIDWVATYTLSPPGLVARMALRAPNA
FEPEPMVEGLKLVGGEPERMTPARARVLDTASDGFSWTRSGLAHAAGVSTSVVDGLITLG
IFETVFLPPPPVVAMPDPDFAAARLEGPQKQAAEEIVSDVRKGEFSVSLIDGVTGSGKTE
VYFEAIAETLKRGKQVLILLPEIALTASFMERFQDRFGAKPAEWHSDLAPRMREKVWRQA
VTGEVRVVAGARSALFLPFEDLGLIIVDEEHDPAYKQEDRVFYNARDMAVVRGRIGDFPV
ILVSATPSVESQVNGQSGRYSTVHLPTRFGDAAMPDLHLVDMRRHAPERGGFLSPVLIRA
IGKTVEKREQALLFLNRRGYAPLTLCRVCGHRFQCPQCSSWLVEHRFRKQLQCHQCGHAE
RTPEACPECGTLDHLVACGPGVERIAEEVERHFPEARTIVLSSDIMGGVKRLRLELEAIA
KGEADIVIGTQLVAKGHNFPLMTLVGIVDADLGLANGDPRAAERTFQLLSQVTGRAGRTG
LKSHGLLQTYQPQHPVMQAIVSGDSDAFYEREITERERALLPPFGRLASIIVSAETRHDA
ENHARGMRNAAPQVSGISVLGPAEAPLALVRGRHRFRLLVHGRRNSDMQGFLRVMLSQSP
KERGSVQVQLDIDPQSFL
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
atgagcacagattcgtccgatctctttggcgcgcttttcgaggcaccgcccgcgaaccga
acggttccggtgctggtgccgatgccggcgccgaaaccctattcctattcggtgccggat
ggcatggcggtcgagcccggctcggtcgtgcaggtgccgctcgggccgcggcaggtgatc
ggcgtcgtctgggacagcggcgaggacggcgtcgatccgaagaagcttcgaccgatcagc
catgtcttcgactgcccgccgcttgccagggagatgcgggatttcatcgattgggtggcg
acttatacgctctcgccgcccggcctcgtcgcgcgcatggcgctgcgggcgccgaacgcc
ttcgagccggaaccgatggtggaggggttgaagctcgtcggcggcgaaccggagcggatg
acgccggcgcgcgcccgggtcctcgatacggcctccgacggcttttcctggacacgcagc
ggccttgcccatgcggcgggtgtctcgacgagtgtcgtcgacgggctgatcacactcggc
atcttcgagactgtattcctgccgccgccgccggtcgttgcgatgccggatccggatttt
gccgccgcacgtctcgaagggccgcagaagcaggcggccgaagagatcgtttccgacgtc
cgcaagggcgaattttcggtgtcgctgatcgacggggtaaccggctccggcaagacggag
gtttatttcgaggcgattgccgagacgctgaaacgcggcaagcaggtgttgatcctgctg
ccggagatcgcgctaacggccagtttcatggagcgcttccaggaccgcttcggggcaaag
cctgccgaatggcattccgatcttgcgccgcgcatgcgcgaaaaggtctggcgccaggcg
gtgaccggcgaggtgcgcgtcgtggcgggggctcgctcggcgctcttcctgcccttcgag
gatctcggcctgatcatcgtcgacgaggaacacgatcccgcctacaagcaggaggatcgc
gtcttttacaatgctcgcgatatggccgtcgtgcgcggccgcatcggcgatttccccgtc
attctggtgtcggcgacgccgtcggtcgaaagccaggtcaacggccagagcggacgctac
agcaccgtccacctgccgacgcgtttcggcgatgcggcgatgccggacctgcatctggtc
gatatgcgcaggcacgcgccggagcggggcggcttcctgtcgccggtgctgatccgggcg
atcggcaagacggtggaaaaacgcgaacaggcgctgctgtttctcaaccggcgcggttat
gcgcctctgacgctctgccgggtctgcggccatcggttccaatgcccgcaatgttcgagc
tggctggtggagcatcgtttccgcaagcagctgcaatgccatcaatgcggccatgccgag
cgcacgccggaggcatgcccggaatgcggcacgctcgaccatctcgtcgcctgcgggcca
ggcgtcgagcgcatcgccgaggaggtggaacggcattttccggaggcgcggacgatcgtt
ctctcctcggatatcatgggcggggtgaagcggctgcggctggagctggaagcgatcgcc
aagggcgaagccgatatcgtcatcggcacccagcttgtggccaagggccacaattttccg
ctgatgacgctggtcggcatcgtcgatgccgatctcggccttgccaacggcgacccgcgc
gcggccgagcgcaccttccagcttttgtcgcaggtgaccggccgggccgggcgcaccgga
ctcaagagccatgggctgctgcagacctaccagccgcagcatcctgtcatgcaggcaatt
gtctccggcgattccgacgctttctacgagcgcgagatcaccgaacgcgaacgcgcccta
ttgccgcccttcggcaggctcgcctcgatcatcgtttctgccgaaacccgccacgacgcc
gaaaaccatgcgcgcggcatgcgcaacgccgcaccgcaggtgtcgggcatctcggtgctc
ggcccggccgaagcgccgcttgcgctggtgcgcggccgccatcgcttccgtcttttggtc
cacggccggcggaactctgacatgcagggctttctgcgggtaatgctctcacaatcgccc
aaagagcgcggatcggtgcaggtgcagctggatatcgatccgcagagttttctctaa
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