Rhizobium johnstonii: RL4429
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Entry
RL4429 CDS
T00402
Symbol
lpdA
Name
(GenBank) putative dihydrolipoamide dehydrogenase
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
rle
Rhizobium johnstonii
Pathway
rle00010
Glycolysis / Gluconeogenesis
rle00020
Citrate cycle (TCA cycle)
rle00260
Glycine, serine and threonine metabolism
rle00280
Valine, leucine and isoleucine degradation
rle00310
Lysine degradation
rle00380
Tryptophan metabolism
rle00620
Pyruvate metabolism
rle00630
Glyoxylate and dicarboxylate metabolism
rle00640
Propanoate metabolism
rle00670
One carbon pool by folate
rle00785
Lipoic acid metabolism
rle01100
Metabolic pathways
rle01110
Biosynthesis of secondary metabolites
rle01120
Microbial metabolism in diverse environments
rle01200
Carbon metabolism
rle01210
2-Oxocarboxylic acid metabolism
rle01240
Biosynthesis of cofactors
Module
rle_M00009
Citrate cycle (TCA cycle, Krebs cycle)
rle_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
rle_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
rle_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
rle00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
RL4429 (lpdA)
00020 Citrate cycle (TCA cycle)
RL4429 (lpdA)
00620 Pyruvate metabolism
RL4429 (lpdA)
00630 Glyoxylate and dicarboxylate metabolism
RL4429 (lpdA)
00640 Propanoate metabolism
RL4429 (lpdA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
RL4429 (lpdA)
00280 Valine, leucine and isoleucine degradation
RL4429 (lpdA)
00310 Lysine degradation
RL4429 (lpdA)
00380 Tryptophan metabolism
RL4429 (lpdA)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
RL4429 (lpdA)
00670 One carbon pool by folate
RL4429 (lpdA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rle04147
]
RL4429 (lpdA)
Enzymes [BR:
rle01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
RL4429 (lpdA)
Exosome [BR:
rle04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
RL4429 (lpdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
Pyr_redox_3
FAD_oxidored
NAD_binding_8
FAD_binding_2
HI0933_like
GIDA
Thi4
Lys_Orn_oxgnase
FAD_binding_3
AlaDh_PNT_C
DAO
3HCDH_N
Lycopene_cycl
Motif
Other DBs
NCBI-ProteinID:
CAK09915
UniProt:
Q1MAX0
LinkDB
All DBs
Position
complement(4710176..4711582)
Genome browser
AA seq
468 aa
AA seq
DB search
MSYDVIIIGTGPGGYVCAVKAAQLGLKVAVVEKRATYGGTCLNVGCIPSKALLHASEMFH
QAGHGMSALGIDVPAPTLNLGNMMAHKDATVKSNVDGVAFLFKKNKIDAFQGTGKIVSAG
KVSVTADDGKVQDIEGKNIVIATGSDVAGIPGVQVEIDEKTIISSTGGIALEKVPETLIV
VGGGVIGLELGSVWSRLGAKVTVVEYLDTILGGMDGEVSKQFQRMLAKQGIDFNLSAKVT
GVEKADKGAKVTFEPVKGGDKVTLDAEVVLIATGRKPYTAGLGLEEAGVTLDNRGRVEID
GHYKTNVDGIYAIGDVVKGPMLAHKAEDEGVALAEILAGQHGHVNYEVIPSVVYTQPEIA
SVGKTEEELKAAGVAYKVGKFPFTANGRARAMLATDGFVKILADKETDRVLGGHIVGFGA
GEMIHEIAVLMEFGGSSEDLGRTCHAHPTMSEAVKEAALATFFKPIHM
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgtcttacgatgtgatcattatcggaaccggcccgggcggctatgtctgcgccgtcaag
gcggcccagcttggccttaaggtcgccgtcgtcgaaaagcgggcgacctatggcggcacc
tgcctgaacgtcggctgcattccgtcgaaggcgctgctgcatgcctccgaaatgttccat
caggccggccacgggatgagcgcgctcggtatcgacgtcccggcgccgacgctcaatctc
ggcaatatgatggcccacaaggatgcgacggtgaagtcgaatgtcgacggcgtcgccttc
ctcttcaagaagaacaagatcgatgccttccagggtaccggcaagatcgtctcggccggc
aaggtctccgtcaccgctgatgacggcaaggtgcaggacatcgaaggcaagaacatcgtc
atcgccacaggttccgacgtcgccggcattcccggagtgcaggtcgaaatcgacgaaaag
accatcatctcgtccaccggcggcatcgcgctggagaaggtgccggaaacgctgatcgtc
gtcggcggcggcgtcatcgggctcgaactcggttccgtctggtcgcgcctcggcgccaaa
gtcaccgtcgtcgaatatctcgacaccatccttggcggcatggacggcgaagtctccaag
caattccagcgcatgctggccaagcagggcatcgatttcaatctcagcgccaaggtcacc
ggcgtcgaaaaggccgacaagggcgccaaggtcactttcgagccggtcaagggcggcgac
aaggtgacgctcgacgccgaggtcgtgctgatcgccaccggccgcaagccctatacggcg
ggtcttggcctcgaagaggccggtgtgacgctcgacaatcgcggccgtgtcgagatcgat
ggtcactacaagaccaatgtcgacggcatctatgcgatcggcgatgtggtcaaggggccg
atgctggcgcacaaggcggaagatgagggcgtggcgcttgccgaaatcctcgccggacag
catggccatgtgaactacgaggtcattccgagcgtcgtctacacccagccggaaatcgct
tcggtcggcaagaccgaggaagagctgaaggcggcaggcgtcgcttacaaggtcggcaag
ttccccttcacggcgaacggccgggcgcgtgcgatgctggcgaccgacggcttcgtcaag
atccttgccgacaaggaaaccgaccgggtgctcggcggccatatcgtcggcttcggcgcc
ggcgagatgatccacgagatcgccgtgctgatggaattcggcggttcgtcggaagatctc
ggccgtacctgccacgcgcatccgaccatgtcggaagcggtgaaagaggctgcgctcgca
accttcttcaagccgatccatatgtaa
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