Rhizobium johnstonii: RL4443
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Entry
RL4443 CDS
T00402
Symbol
sdhB
Name
(GenBank) putative succinate dehydrogenase iron-sulfur protein
KO
K00240
succinate dehydrogenase iron-sulfur subunit [EC:
1.3.5.1
]
Organism
rle
Rhizobium johnstonii
Pathway
rle00020
Citrate cycle (TCA cycle)
rle00190
Oxidative phosphorylation
rle00650
Butanoate metabolism
rle00720
Other carbon fixation pathways
rle01100
Metabolic pathways
rle01110
Biosynthesis of secondary metabolites
rle01120
Microbial metabolism in diverse environments
rle01200
Carbon metabolism
Module
rle_M00009
Citrate cycle (TCA cycle, Krebs cycle)
rle_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
rle_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
rle00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
RL4443 (sdhB)
00650 Butanoate metabolism
RL4443 (sdhB)
09102 Energy metabolism
00190 Oxidative phosphorylation
RL4443 (sdhB)
00720 Other carbon fixation pathways
RL4443 (sdhB)
Enzymes [BR:
rle01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
RL4443 (sdhB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fer2_3
Fer4_17
Fer4_8
Fer4_10
Fer2
Fer4_18
Fer4_7
Motif
Other DBs
NCBI-ProteinID:
CAK09929
UniProt:
Q1MAV6
LinkDB
All DBs
Position
complement(4724413..4725192)
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AA seq
259 aa
AA seq
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MVELALPKNSQMREGKVWPKPAGAKNTREFRVYRWSPDDGQNPSIDTFYIDVDDCGPMVL
DGLLYIKNKIDPTLTLRRSCREGICGSCAMNIDGTNTLACTKGLDDIKGAVKIYPLPHLP
VVKDLVPDLTNFYAQHRSIEPWLKTVSPAPAKEWKQSHEDRQKLDGLYECILCACCSTSC
PSYWWNGDRYLGPAVLLQAYRWLIDSRDEATGERLDNLEDPFRLYRCHTIMNCAQTCPKG
LNPAKAIAEIKKMMVERRV
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atggttgaactcgctctccccaagaattctcagatgcgcgaaggcaaggtctggccgaag
ccggctggtgccaagaacacccgcgaattccgcgtctatcgctggagccccgatgacggt
cagaacccgtctatcgataccttctatatcgatgtcgacgattgcggaccgatggtgctc
gacggtctgctctacatcaagaacaagatcgatccgacactgacgctgcgccgctcctgt
cgcgagggcatttgcggctcctgcgcgatgaatatcgacggcacgaacacgctcgcctgc
accaagggcctcgacgatatcaagggtgcggtgaagatctatccgctgccgcatctgccg
gtcgtcaaggatctggttcccgacctcaccaacttctatgcccagcatcgctcgatcgag
ccatggctgaagaccgtgtcgccggcgccggccaaggaatggaaacagagccacgaggac
cgacagaagctcgacggcctttatgaatgcatcctctgcgcctgctgctcgacctcctgt
ccgagctactggtggaatggcgaccgctatctcggtccggccgttctgctgcaggcctat
cgctggctgatcgattccagagacgaggcgaccggcgagcgtctcgacaatctcgaggat
ccgttccgcctctatcgctgccacacgatcatgaactgcgcgcagacctgcccgaagggt
ctcaacccggccaaggcgatcgccgaaatcaagaagatgatggtcgagcgccgggtttga
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