Rhizobium johnstonii: RL4444
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Entry
RL4444 CDS
T00402
Symbol
sdhA
Name
(GenBank) putative succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
rle
Rhizobium johnstonii
Pathway
rle00020
Citrate cycle (TCA cycle)
rle00190
Oxidative phosphorylation
rle00650
Butanoate metabolism
rle00720
Other carbon fixation pathways
rle01100
Metabolic pathways
rle01110
Biosynthesis of secondary metabolites
rle01120
Microbial metabolism in diverse environments
rle01200
Carbon metabolism
Module
rle_M00009
Citrate cycle (TCA cycle, Krebs cycle)
rle_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
rle_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
rle00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
RL4444 (sdhA)
00650 Butanoate metabolism
RL4444 (sdhA)
09102 Energy metabolism
00190 Oxidative phosphorylation
RL4444 (sdhA)
00720 Other carbon fixation pathways
RL4444 (sdhA)
Enzymes [BR:
rle01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
RL4444 (sdhA)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
GIDA
DAO
Pyr_redox_2
Thi4
FAD_binding_3
FAD_oxidored
HI0933_like
GMC_oxred_N
Motif
Other DBs
NCBI-ProteinID:
CAK09930
UniProt:
Q1MAV5
LinkDB
All DBs
Position
complement(4725211..4727052)
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AA seq
613 aa
AA seq
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MAPTSPAQNGKAYRYVDHSYDVIVVGAGGAGLRATLGMAEQGFRTACITKVFPTRSHTVA
AQGGIAASLRNMTPDSWQWHLYDTVKGSDWLGDVDAMQYLTMEAPKAVYELEHYGVPFSR
NEEGKIYQRPFGGHMQNYGEGPPVQRTCAVADRTGHAILHTLYGQSLRNNAEFFIEYFAL
DLIMSEDGSRCIGVVAWCLDDGTIHRFAAKMVVLATGGYGRAYFSATSAHTCTGDGGGMV
ARAGLPLQDMEFVQFHPTGIYGSGCLITEGARGEGGYLVNSEGERFMERYAPSAKDLASR
DVVSRCMTLEIREGRGVGKAKDHIFLHLDHLDPAVLHERLPGISESAKIFAGVDVTREPI
PVLPTVHYNMGGIPTNYWGEVLNADGANPERIIPGLMAVGEAGCASVHGANRLGSNSLID
LVVFGRAAAIRAGEVIDRAAPIPHLNVAACDKIMDRFDGLRHASGGTPTAELREKMQRAM
QEDAAVFRTQESLESGCRRISAIWGEMKDIKVTDRSMIWNSDLVETLELQNLMANAITTI
YGAEARKESRGSHAREDYTEGAFAGRDDVNWRKHTLAWVNEAGEVKLDYRPVHTELIAEG
IDPHKIEPKARVY
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atggcaccgacttcacccgcccagaatggcaaagcctacaggtatgtcgatcactcctac
gacgtgatcgtcgtcggcgccggcggcgccgggctgcgcgccacgctcggcatggccgag
cagggtttccgcacggcctgcatcaccaaggtatttccgacccgctcgcatacggtcgcc
gcccagggcggcatcgccgcctcactgcgcaacatgacgccggatagctggcagtggcac
ctctacgacaccgtcaagggctccgactggctcggcgacgtcgacgccatgcagtatctc
accatggaagcgccgaaggcggtctatgagctcgagcattacggcgtgccgttctcgcgc
aacgaggaaggcaagatctatcagcgcccgttcggcggccacatgcagaactacggcgaa
ggcccgccggtacagcgcacctgcgccgttgccgaccgtaccggccacgccattctgcat
acgctctacggccagtcgctgcgcaacaatgccgaattcttcatcgagtatttcgcgctc
gacctgatcatgtcggaagacggcagccgctgcatcggcgtggtcgcctggtgcctcgat
gacggcacgatccatcgcttcgccgccaagatggtggtgctggcgaccggcggctacggc
cgcgcctatttctcggcaacgtctgcgcatacctgcaccggcgacggcggcggcatggtg
gcgcgcgccggcctgccgctgcaggacatggaattcgtccagttccatccgaccggcatc
tacggttcgggctgtctgatcaccgaaggcgcgcgcggcgaaggcggttacctcgtcaac
tccgagggcgagcgcttcatggaacgttacgcaccttcggccaaggatcttgcctcgcgc
gacgtcgtttcgcgctgcatgacgctggaaatccgcgagggccgcggtgtcggcaaggcg
aaggaccacatcttcctgcatctcgaccacctcgatccggccgttcttcatgaacgcctg
ccggggatttccgagagcgccaagatcttcgccggcgtcgacgtcacgcgcgaaccgatc
ccggttctgccgaccgttcactacaatatgggcggcattcccacgaattattggggcgaa
gtgctgaacgccgacggtgccaatccggaacggatcattcccggcctgatggctgtgggt
gaagccggctgtgcttcggtgcacggcgccaaccgtctcggctccaactcgctgatcgac
ctcgtggtcttcggccgcgccgctgcgatccgcgccggcgaggtgatcgaccgcgccgcg
ccgatcccgcatctcaatgtcgcagcctgcgacaagatcatggaccgcttcgacggtctg
cgtcacgccagcggcggcacgccgacggcggaactgcgcgagaagatgcagcgcgccatg
caggaagacgccgcggtgttccgcacgcaggaatcgctggaatccggttgccggcgtatc
tctgcgatctggggcgagatgaaggacatcaaggtcaccgaccgctcgatgatctggaac
tcggatctggtcgagacgctggagctgcagaacctgatggccaacgccatcacgacgatc
tatggcgccgaggcccgcaaggagagccgcggttcgcatgcacgcgaagactataccgag
ggtgcattcgccggccgcgacgacgtcaactggcgcaagcacacactcgcctgggtgaac
gaggcgggcgaggtcaagctcgactaccggccggtccataccgagctcattgccgaaggc
atcgatccgcacaagatcgagccgaaggctcgcgtgtactga
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