Rhizobium johnstonii: RL4547
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Entry
RL4547 CDS
T00402
Symbol
ffh
Name
(GenBank) putative signal recognition particle protein (fifty-four homolog)
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
rle
Rhizobium johnstonii
Pathway
rle02024
Quorum sensing
rle03060
Protein export
rle03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
rle00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
RL4547 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
RL4547 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RL4547 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
rle02044
]
RL4547 (ffh)
Enzymes [BR:
rle01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
RL4547 (ffh)
Secretion system [BR:
rle02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
RL4547 (ffh)
Eukaryotic Sec-SRP protein
RL4547 (ffh)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
CbiA
AAA_33
AAA_25
Zeta_toxin
AAA_30
nSTAND_NTPase5
DnaB_C
AAA_19
AAA_22
AAA_17
ArsA_ATPase
AAA_31
6PF2K
KAP_NTPase
AAA_14
ResIII
AAA_5
APS_kinase
ATPase
AAA_16
AAA
Thymidylate_kin
nSTAND3
AAA_7
NACHT
NPHP3_N
NB-ARC
Motif
Other DBs
NCBI-ProteinID:
CAK10031
UniProt:
Q1MAK7
LinkDB
All DBs
Position
4827723..4829309
Genome browser
AA seq
528 aa
AA seq
DB search
MFENLQDRLGSILNGLTGRGALSEADVSAALREVRRALLEADVALDVVRSFTDRVREKAV
GAEILKSIKPGQMVVKIVHDELIEMLGGEGVGIDLHAPAPVVVMMVGLQGSGKTTTSAKI
AHRLSTREKKKVLMASLDTRRPAAQEQLRQLGAQANIDTLPIISGQSPTDIAARAVQAAK
LGGHDVVILDTAGRTHIDEPLMVEMADIKKRSNPHEILLVADSLTGQDAVNLARNFDERV
GITGLVLTRMDGDGRGGAALSMRAVTGKPIKLIGVGEKMSELEEFHPRRIADRILGMGDI
VSLVERAAENIDAEKAAAMAAKMAKGKFDLDDLADQLRQMQKMGGMGGIMGMMPGMAGMK
DKMAAAGLDDKLFGRQIAIIQSMTKAERTNPDLLKHSRKKRIAAGSGTDAAAINKLLKMH
RQMADMMKMMGGKGKGGMMKQMMGGLAGKMGLGGGMGGMGGGMPDLSNIDPRQLEALQKQ
AEAAGLGKPGGGMPGLGGLPGGLSGLGGAKLPGLGGGFPGLPGLPKKK
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atgtttgaaaacctccaggaccgtcttggatccattctgaatggactgacaggccgtggc
gcgctttcggaagccgatgtttccgcagcgctgcgcgaggttcgccgtgcgttgctggag
gccgacgtcgcgctcgacgtcgtgcgttccttcaccgaccgcgtgcgtgaaaaggccgtc
ggcgccgagatcctgaagtcgatcaagcccggccagatggtcgtcaagatcgtgcatgac
gaactgatcgagatgctgggcggcgaaggggtcggcatcgacctgcatgcgccggccccc
gtcgtcgtcatgatggtcggcctgcagggttccggcaagacgacgacatcggcgaagatt
gcccatcgcctgtcgacgcgcgagaagaagaaggtgctgatggcatcgctcgacacgcgc
cgtccggcagcccaggagcagcttcgccagcttggcgcgcaggccaatatcgacacgctg
ccgatcatatcgggccagtcgccgacggatatcgccgcccgcgccgtgcaggcagccaag
cttggcggccatgatgtcgtcatcctcgataccgccggccgcacgcatatcgacgagccc
ttgatggtcgagatggccgacatcaagaagcggtcgaacccgcatgaaattctgctggtc
gccgatagcctcaccggccaggacgccgtcaacctcgcccgaaatttcgacgaacgcgtc
ggcatcaccggtctggtgctgacccgcatggacggcgatggccgcggcggtgccgccctt
tcgatgcgcgccgtcaccggcaagccgatcaagctgatcggcgtcggcgagaagatgagc
gagctggaggaattccatcctcgccgcatcgccgaccgtatcctcggcatgggcgacatc
gtctcgctcgtcgagcgcgcggccgaaaacatcgacgccgagaaggcagccgccatggcc
gccaagatggccaagggcaagttcgacctcgacgatttggccgaccagctgcgccagatg
cagaagatgggcggcatgggcggtatcatgggcatgatgcccggcatggccggcatgaag
gacaagatggccgcagccggcctcgacgacaagcttttcggccgccagatcgccatcatc
cagtcgatgaccaaggccgagcgcaccaatcccgacctgctcaagcattcgcgcaagaag
cgcatcgccgccggctccggcaccgatgccgccgccataaacaagcttctgaagatgcac
cgccagatggcggacatgatgaagatgatgggcggcaagggcaaaggcggcatgatgaag
cagatgatgggcggccttgccggcaagatggggctcggcggcggcatgggcggcatgggt
ggcggcatgcccgatctctcgaatatcgatccgcggcagcttgaggccctgcagaagcag
gcggaagcggcggggcttggaaaaccgggtgggggtatgcccggtctcggcggtctgccg
ggtggtctttcgggcctcggcggcgccaagctgccgggccttggcggtggtttcccggga
ttgcccggattgccgaagaagaagtga
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