Rhizobium johnstonii: RL4580
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Entry
RL4580 CDS
T00402
Name
(GenBank) putative ATP-binding component of ABC transporter
KO
K02031
peptide/nickel transport system ATP-binding protein
K02032
peptide/nickel transport system ATP-binding protein
Organism
rle
Rhizobium johnstonii
Pathway
rle02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rle00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RL4580
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rle02000
]
RL4580
Transporters [BR:
rle02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
RL4580
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
SMC_N
AAA_21
AAA_22
AAA_16
AAA_29
NACHT
RsgA_GTPase
AAA_25
PRK
AIG1
ABC_ATPase
DUF87
CbiA
Spheroidin
Motif
Other DBs
NCBI-ProteinID:
CAK10063
UniProt:
Q1MAH5
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Position
4861075..4862913
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AA seq
612 aa
AA seq
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MSDVSSASASPVLSVRNLTTSFLVDGDWKPVVRDVSFEVMPGETVAIVGESGSGKSVTSL
SIMRLLAKGSSRIDGAISLNGKDVLTLPEKEMRQVRGNDAAMIFQEPMTSLNPIFTIGRQ
ISEALTCHGDIGKAEARAETVRLLEKVRIPNAASRFDEYPHQFSGGMRQRVMIAMALASR
PKLLIADEPTTALDVTIQGQILDLIKMLQEEEGMSVLFITHDMGVVAEIADRTIVMYRGE
AVETGTTDDIFHRGRHPYTRALLSAVPRLGSMADRKWPLRFPVVDTATGERREPVEVADT
VDRRRTPILEVKNLVTRFDIRGGLLGRKTGAIHAVEDVSFDLFQGETLSLVGESGCGKST
TGRSITRLVQPNGGSVSLDGYDVLSLDAVSLRRMRRSIQMIFQDPFASLNPRMTVGAAVA
EPITEHGLGTGAQAREKAADLLERVGLKPDMMKRYPHEFSGGQRQRICIARALALDPKVI
VADESVSALDVSIKAQVCNLLMDLQQSLNLAFLFISHDMAVVERVSHRVAVMYLGEIVEI
GPRAELFSNPQHAYTKKLMAAVPVPDPSRRGIKRNLGTDELKSPVRPVGYVAPPRRYREV
SAGHLVRLDEAA
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atgagtgatgtttcttcagcctccgcctccccggttctttccgtccggaacctgacgacc
tccttcctcgtcgacggcgactggaagccggtggtgcgcgacgtctccttcgaggtcatg
cctggcgagacggtggcgatcgtcggcgaaagcggctcgggcaagagcgtcacctccctt
tcgatcatgcgattgctcgccaagggatcgagccgcatcgacggcgccatcagcttgaac
ggcaaggatgttctcacccttccggaaaaggagatgcgccaggtgcgcggcaacgacgcc
gccatgatcttccaggagccgatgacatccctcaacccgatcttcaccatcggccgccag
atctccgaagcgctgacctgccacggtgatatcggcaaggccgaggcgcgggccgaaacc
gtgcgcctgctggaaaaggtccgcatcccgaacgccgcctcgcgcttcgacgaatatccg
caccagttctcgggcggcatgcgccagcgcgtgatgatcgccatggcgctcgccagccgg
ccgaaattgctgatcgccgacgagccgacgacggcgctcgacgtgacaatccagggccag
atcctcgacctgatcaagatgctgcaggaagaagagggcatgtcggtgctctttatcacc
cacgacatgggcgtcgtcgccgaaatcgctgaccgcaccatcgtcatgtatcgcggcgag
gcggtggaaaccggcacgaccgacgacatcttccatcgcggcaggcatccctatacccgc
gcactgctctcggccgtgccgcgcctcggctcgatggccgaccggaaatggccgctgcgt
ttcccggtcgtcgataccgcgaccggcgaacgccgcgaaccggtcgaggtggccgacacc
gtcgaccgccgccggacgccgatcctcgaagtcaagaacctcgttacccgtttcgatatc
cgcggcggcctactcggccgcaagaccggcgcgatccatgcggtcgaggacgtctccttc
gatctcttccagggcgagacgctgtcgctcgtcggcgaatccggttgcggcaaatcgacc
accggtcgctcgatcacccgcctcgtccagccgaacggcggcagtgtcagcctcgacggc
tatgacgtgctgagccttgacgcggtcagtctcagacggatgcgccgcagcatccagatg
atctttcaggaccccttcgccagcctcaacccgcgcatgaccgtcggcgccgccgtcgcc
gaacccatcaccgaacatggcctcggcaccggcgcccaggcccgcgaaaaggcggccgat
cttctcgaacgcgtcggactgaaacccgacatgatgaaacggtatccgcacgaattctcc
ggcggtcagcgccagcgcatctgcattgcccgagcgctcgcactcgatccaaaggtgatc
gtcgccgatgaaagcgtttcggccctcgatgtgtcgatcaaggcgcaggtctgcaatctg
ctgatggacctgcagcaaagcctcaacctcgccttcctgttcatttcccacgacatggct
gtggtcgagcgcgtcagccatcgggtcgcggtgatgtatctcggcgaaatcgtcgagatc
ggcccgcgcgcggaattgttcagcaatccacagcacgcctacacgaagaagctgatggca
gccgtgcccgtccccgacccctcgcggcgcggcatcaagcgcaacctcggaaccgacgag
ctcaagagccccgttcgcccggttggctacgtcgcaccgccgcgccgatatcgggaagtg
tcggcaggtcatctggtgcggctcgatgaagccgcctga
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