Rhizobium johnstonii: RL4697
Help
Entry
RL4697 CDS
T00402
Symbol
dnaE1
Name
(GenBank) putative DNA polymerase I alpha subunit
KO
K14162
error-prone DNA polymerase [EC:
2.7.7.7
]
Organism
rle
Rhizobium johnstonii
Pathway
rle03030
DNA replication
rle03430
Mismatch repair
rle03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rle00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RL4697 (dnaE1)
03430 Mismatch repair
RL4697 (dnaE1)
03440 Homologous recombination
RL4697 (dnaE1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rle03400
]
RL4697 (dnaE1)
Enzymes [BR:
rle01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RL4697 (dnaE1)
DNA repair and recombination proteins [BR:
rle03400
]
Prokaryotic type
TLS (translesion DNA synthesis) factors
Other SOS response factors
RL4697 (dnaE1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
HHH_6
tRNA_anti-codon
PHP
T2SSK
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
CAK10180
UniProt:
Q1MA60
LinkDB
All DBs
Position
complement(4998803..5002267)
Genome browser
AA seq
1154 aa
AA seq
DB search
MKSEPAFFEIGTRTNFSFLEGASGPEEMVVQAAHLRLGGLGIADRNSVAGVVRAHAQAEQ
LEERYKNRDEIMAQAKKEGKEAEILDPIRIQPGARLVFSDGTPDILAYPCNRRGWANLCR
LLTAGNLKEEAVKGSCILTEAELMKWGDEMMLALVPDRTLAGHQAGQSTLEDYLERFRRR
FRKAFYMALAPAYDGRDRQVFAVLAMLAARNRVPLIATNQPLYHHPERRPLSDVVIAIRE
HVQIAQAGFLLAPNAERYLKDSREMTRIFRDYPNAVENTQVFFDRLIFSLKELEHNYPPE
NDPGETPQETLERLTRAGAARRYPEGIPPKVAQQIDYELDLIKKKKYASYFLTVHRIIQH
ARYKLNILCQGRGSAANSVICYCLEITEVDPEKSTLLFDRFISMDRDEPPDIDVDFEHDR
REEVIQFIYENYKREHAGLTAGVTTYRTRSAGREVSKAFGLSEDVQSAISSLVWGWSEDN
LSERDAKAAGLDIKDPVTRNVLQYASELLGFPRHLTQHVGGFVITRDRLDEVVPIMKTAM
PDRYMIEWDKDDLDNVKILKVDVLALGMLTCLRKAFSLLELHYDVKKTLADLGNKEHGDE
GEPVYEMMGRADTLGVFQIESRAQMSMLPRLKPKVFYDLVIEVAIVRPGPIQGDMVHPYL
KRREQRAKNIPIEYPSPELKDVLKRTLGVPLFQEQAMQIAITAAGFKPAEADRLRRSMAT
FKRTGTIDNFKKRFVDGMIENNYAREFAEQCFKQIKGFGEYGFPESHAASFALLVYASSW
LKAYYPDIFCAAMLNSQPMGFYAPAQLVRDAREHGVKILPVDINESNWDCDLEEAAFDRN
AVDFRHHEMREIIKTRHAVRLGFRQIKGLSTDDMERLVDNRGEGYSSVRDLWLRSGLQKS
VIERLADADAFQSLKLSRREALWAVRALDVKSAAEELPLFEQVRHVDLQAEPVAKLPEML
PGEQVIEDYRYLSLSLKAHPVSFLREELRKAGVTRSVDLLKVANGQRVTIAGLVLVRQRP
GSAKGVIFMTLEDETGVANVIVWSKMFDKYRSVVMGARLVKVRGRLQSQSGVIHTVVEHI
EDMTPALGILQREARRFGVCERADEVLRPGADQRQKKLANVQERAELEKRMVATGRHAGA
TETAEVMPRGRNFH
NT seq
3465 nt
NT seq
+upstream
nt +downstream
nt
atgaagagcgaacctgcatttttcgagatcggcacaaggacgaatttctcgtttcttgaa
ggcgcttccggcccggaggagatggtcgtacaggctgctcatctccggctcggcggtctc
gggattgcggaccggaattcggttgccggcgtggtgcgggcgcatgcgcaggcggagcag
cttgaggagagatataagaacagggatgagattatggcccaagcgaagaaggaaggaaaa
gaggcggagatcctcgatcctatccggattcagccgggcgcccgtctcgtcttttccgat
ggaacgcctgatatcctcgcctatccatgcaatcgacggggctgggcgaacctttgtcgt
cttctcaccgccggcaatctgaaggaagaagcggtaaagggaagctgcatcctgacggaa
gcggaactcatgaaatggggggacgagatgatgcttgccctcgttcccgatcgcaccctt
gccggtcatcaggcgggtcagtcgacgctggaagattatctggaacggtttcgcagacgc
ttccgcaaggctttttatatggcgctggcgccagcctatgatggccgcgacaggcaggtc
tttgcagtgcttgccatgcttgccgctcgaaaccgtgtgccgctgattgcaaccaaccag
ccgctttaccaccatcctgaacgccggccgctttcggatgtcgtgatcgcgatccgggag
catgtacagatagcacaagccggatttctgctggcgccgaatgccgagcgctacctcaag
gattcacgtgaaatgacccggatcttccgggactatcctaatgcggtcgagaatacgcag
gtatttttcgacaggttgatcttctccctgaaggaactggagcacaattatccgccagaa
aacgatcccggcgaaacgccgcaggagacactcgaaaggctgacgagagcgggagccgct
agacgctatcccgagggtatcccgcccaaggtggcgcaacagatcgattatgaactcgat
ctcattaaaaagaagaaatatgcctcttatttcctgacagttcacaggatcatccaacac
gcccgctataaacttaatatcctatgccagggacgcggatcggcggcaaattcggtcatc
tgctattgcctcgaaataacggaagtcgatcccgaaaagagcacgctgctcttcgatcgc
ttcatttcgatggatcgcgacgaaccgccggatatcgatgtcgatttcgagcatgaccgg
cgtgaagaggtcattcaattcatttacgaaaactacaaaagagaacatgccgggctgacg
gcgggcgtgaccacctaccgcacccgctcggccggccgcgaggtttccaaggccttcggg
ctgtcggaggatgtccagtcggcgatcagcagcctcgtctggggttggtcggaggacaat
ctctccgaacgggatgcaaaggcggcgggactcgacatcaaggatccggtgacccgaaac
gttcttcagtatgcttccgaacttctcggcttcccgcgccacctcacccagcatgtcggc
ggctttgttattacgcgggacaggctcgacgaggtggtgccgatcatgaagacggcgatg
ccggatcgctacatgatcgagtgggacaaggacgacctcgacaacgtcaagatcctcaag
gtggatgtgctggcgctcggcatgctgacctgcctgcgaaaagccttctcgctgcttgaa
ttgcattacgacgtaaagaagacgctcgcagatctcggcaacaaggagcatggagacgaa
ggcgagccggtttacgagatgatgggccgggccgatacgctcggcgtcttccagatcgaa
agccgggcgcagatgagcatgctgccgcgtctcaagccgaaggtgttttacgatctcgtc
atcgaggtggcgatcgtgcggccaggcccgatccagggcgatatggtgcatccctatctg
aagcgccgggagcagcgggccaagaacattccgatcgaatatccgagtccggaactaaaa
gatgtcctaaagagaactctcggagttcctctgttccaagagcaagccatgcagatcgcc
atcactgcagcaggcttcaagccagcggaagccgatcgcctcagacggtcgatggcgaca
ttcaagagaacaggcacaatcgataattttaaaaagcgtttcgtcgatgggatgatcgaa
aataactacgcccgcgaattcgcggaacagtgtttcaagcaaatcaagggcttcggtgaa
tatggttttccagaaagccatgccgcttccttcgcgctgctcgtctatgcctcctcatgg
ctcaaggcctattatcccgacatcttctgcgcggcgatgctgaattcccagccgatgggc
ttttatgcgccggcgcagctggtccgggatgcacgcgagcacggagtaaagatcctgccg
gtcgatatcaatgaatcgaactgggattgcgatctggaagaggccgctttcgatcggaat
gccgtcgattttcgacatcatgagatgcgcgagatcatcaagacccggcatgcggtgcgg
ctcggcttccggcagatcaagggtctctcgacagacgatatggaacggctcgtcgataat
cgaggcgaaggctacagctcggtgcgggatctctggctgcggtccggtctgcagaagtcg
gtcatcgagcgactggcggatgccgatgcgttccaatccctcaaactgtcacgacgcgag
gcgctctgggcggtgcgggcgctggatgtgaagagcgcggccgaggaattgccgcttttc
gagcaggtccgccatgtcgacctccaggccgagcccgtagcgaagctgccggaaatgctg
ccgggagagcaggttatcgaggattatcgttatctctcactgtcgctgaaggcgcacccc
gtctccttcctgcgcgaggaattgcgcaaggctggcgtgacgcgcagtgtcgatctgttg
aaggtcgcgaacgggcagagggtgacgatcgcgggcctcgtgctggtgcgccagcggccg
ggttcggccaaaggcgtgatcttcatgacgctggaagacgagaccggcgtggccaatgtg
atcgtctggtcgaaaatgttcgacaaataccggtcggtcgtgatgggcgcccggctggta
aaagtccgcggcaggctgcaaagccagagcggggtgatccatactgtcgtcgagcatatc
gaggacatgacgccggcgctcggtatcctgcaacgcgaggcccggcgtttcggcgtctgc
gagcgggcagacgaggtgctgaggccgggtgccgatcagcggcagaaaaagcttgcgaat
gtgcaggaaagggcggagctggaaaaacggatggttgccacaggccgccatgcgggcgcg
acggaaaccgctgaggtgatgccgcgcggacgcaacttccattga
DBGET
integrated database retrieval system
