Rhizobium johnstonii: RL4734
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Entry
RL4734 CDS
T00402
Name
(GenBank) conserved hypothetical protein
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
rle
Rhizobium johnstonii
Pathway
rle03030
DNA replication
rle03430
Mismatch repair
rle03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rle00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RL4734
03430 Mismatch repair
RL4734
03440 Homologous recombination
RL4734
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rle03032
]
RL4734
03400 DNA repair and recombination proteins [BR:
rle03400
]
RL4734
Enzymes [BR:
rle01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RL4734
DNA replication proteins [BR:
rle03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
RL4734
DNA repair and recombination proteins [BR:
rle03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
RL4734
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta
HI1480
DNA_pol3_delta_C
Motif
Other DBs
NCBI-ProteinID:
CAK10217
UniProt:
Q1MA23
LinkDB
All DBs
Position
5047317..5048357
Genome browser
AA seq
346 aa
AA seq
DB search
MAEIKSHEFETFLQKSARNYRIFVIYGPDRGLVSERASLLAARSGVALDDPFSLTKLDIG
DLQKDPGRLVDEVQSIGLFGGEKLIWIRGAANEKYLVDSLALLAEKPLEAASLIVEAGDL
KKGSLLRKTAEAARSVMTIPSYADDSRALNALIDTELGAEKLGITPAARQALIALIGGDR
IASRNEVRKLALYCRGFDTVEEHHVTEIIGDASAISVDDAVDAILGGDLNAFLHAMQKIS
SSKTAIFLVLQACLKQFQLLDSMRAEMDEKRLQPPQIMQTMGRHLHFRRKPIIEQALRQW
TAESIARESNRLQAAILQSRRRQVLEDSVAMQTLLSTTLQSGRKSA
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
gtggcagagataaaatcccacgaattcgagactttcctgcagaaatcggcacggaactat
cggattttcgtcatctacgggccggatcgcggcctcgtttccgaacgggcaagcctgctc
gccgccaggagcggtgttgctctcgatgatcccttctcgctgacgaagctcgatatcggc
gacctgcagaaagaccccggtcggttggtcgacgaggtccaatcgatcggcctcttcggc
ggtgagaaactgatctggatccgtggtgctgccaacgagaaatacctcgtcgattccctg
gcgctgctggccgaaaaaccgctcgaagccgcctctctgattgtggaggccggtgacctc
aagaagggctccctgctgcgcaagaccgcagaagccgcacgatccgtcatgacgatcccc
tcctacgccgatgacagccgcgccttgaatgcattgatcgataccgagctcggtgcagag
aagctcggcattacgccggccgcgcgacaagcgctgatcgcgttgatcggcggcgacagg
atcgcctcccgaaacgaggtgcgcaagcttgctctttactgccgcggcttcgatacggtc
gaagaacatcacgttaccgaaataatcggcgacgccagcgccatctcggttgacgacgcc
gtcgatgccatcctcggcggtgatctcaacgcctttctgcacgccatgcaaaaaatcagc
agctcgaaaaccgcgatctttcttgtcctgcaggcatgcctgaagcaattccaacttctg
gattcgatgcgtgccgaaatggatgaaaaacggctccagccgcctcagatcatgcagacg
atggggcggcatctgcatttccgccgcaagccgatcatcgaacaggcgctgcgccagtgg
accgcggaaagcatcgcccgtgaatccaatcgtttacaggccgctattctgcaaagcaga
cggcggcaggtgctggaagacagcgttgcgatgcaaacgcttctgtccaccacccttcaa
tccggccggaaatccgcctga
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