Rhizobium johnstonii: RL4739
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Entry
RL4739 CDS
T00402
Symbol
trmE
Name
(GenBank) putative tRNA modification GTPase
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
rle
Rhizobium johnstonii
Brite
KEGG Orthology (KO) [BR:
rle00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rle03016
]
RL4739 (trmE)
Transfer RNA biogenesis [BR:
rle03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
RL4739 (trmE)
Prokaryotic type
Methyltransferases
RL4739 (trmE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
FeoB_N
Dynamin_N
AAA_28
RsgA_GTPase
Ras
AAA_18
Roc
AAA_29
Motif
Other DBs
NCBI-ProteinID:
CAK10222
UniProt:
Q1MA18
LinkDB
All DBs
Position
complement(5052759..5054078)
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AA seq
439 aa
AA seq
DB search
MAMLSDTIYALSSGAPPSGVSVVRVSGPLTRDILVKLVGSVPAARHVSHRTIRTRNNQPI
DSGLVLFFPAPNSFTGEDVAELQIHGSRAVLAALFHALGDIPGVRMAVEGEFSRRAFENG
KLDLVEVEGLADLIGAETEMQRRLAVEHSAGGLSAIYDSWAERLTRARALVEAELDFPEE
DDVPGSVSDAVWADMAKLRSDIGDHLAAASAGEIIRDGFKVVIAGAPNAGKSSLLNALAR
RDVAIVTEIAGTTRDVLQVDLDIDGYLIKLFDTAGLREADDKVEMEGVRRARVALRDADL
VLLLVDMTKPLIPDDLEQSSPHVTVGTKKDLTEVNSGRYDLQISTATGDGLPELRRLIGD
IVERRFAGLSMAIPSRQRHKDSLAKCLAALDVALSQTDVNLELRTEQLRIAAEYLGRITG
RVDVEQLLGVIFSEFCIGK
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atggccatgttgagtgataccatatatgcgctatcgagcggtgccccgccttcgggtgtc
tcggtcgttcgggtcagcggcccgctcaccagagacatattggtgaagctcgtcggttct
gttccggcggcccggcatgtatctcaccgaacgattcggactcgtaacaatcagccgatc
gatagcggcctggtgctgttttttcctgctccgaattcgtttaccggcgaggatgttgcc
gagttgcagatccacggcagtagagccgtgctggcagcgctgttccacgcgcttggcgat
attccgggtgttcggatggcggttgaaggcgagttctcccgccgggctttcgagaatggc
aagcttgatctcgttgaggtggaagggctggccgatctgattggcgccgagaccgaaatg
cagagacgccttgcggttgaacatagtgcaggcggactgtccgcgatttacgattcgtgg
gcggaacgattaacgcgggcccgcgcgctggtcgaggcggagcttgatttccccgaggag
gatgacgttcctgggtcggtatcggatgcggtctgggccgacatggcgaagcttcgcagc
gatatcggggatcacctggcggcggcttcggccggcgagatcatccgagacggcttcaag
gtggtcatcgccggcgctccgaatgctggaaagtcgagcctgttgaacgctttggcgcgt
cgagacgtggcaatcgtgacggagattgccggaaccacccgcgatgtcctgcaggttgat
ctcgacattgatggttacctgatcaagctctttgacactgcgggccttcgcgaggcggat
gacaaagtcgaaatggaaggtgtgcggcgcgcgcgcgtagcgctccgtgatgccgatctt
gtcctgttgctggtcgatatgacgaaaccgctgattcccgacgacttggagcagtcctct
ccgcatgttactgtcgggacaaagaaggatctgaccgaagtcaattcgggtcggtatgat
ctgcagatttccactgcgacgggtgacggtctgccggaactacggcggttgatcggcgac
atcgtcgagagacgttttgctggcctgtctatggcaatcccgagccggcagcggcataag
gattcgctagcgaaatgtttagcagcgcttgatgtggccctatcgcagacggatgtgaat
cttgaactgcgaaccgagcagctacgaattgcggcggagtatttgggcagaattaccgga
cgagtggatgtcgaacaattgctcggggtgatcttctccgaattttgtattggcaaatga
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