Rhizobium johnstonii: RL4742
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Entry
RL4742 CDS
T00402
Symbol
hemE
Name
(GenBank) putative uroporphyrinogen decarboxylase
KO
K01599
uroporphyrinogen decarboxylase [EC:
4.1.1.37
]
Organism
rle
Rhizobium johnstonii
Pathway
rle00860
Porphyrin metabolism
rle01100
Metabolic pathways
rle01110
Biosynthesis of secondary metabolites
rle01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
rle00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
RL4742 (hemE)
Enzymes [BR:
rle01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.37 uroporphyrinogen decarboxylase
RL4742 (hemE)
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GFIT
Motif
Pfam:
URO-D
PCP
Motif
Other DBs
NCBI-ProteinID:
CAK10225
UniProt:
Q1MA15
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All DBs
Position
complement(join(5056183..5057142,1..72))
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AA seq
343 aa
AA seq
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MSDTGRKIMRVLSGESLSPPPLWLMRQAGRYLPEYRETRAKAGSFLDLCYTPEHAVEVTL
QPIRRYGFDAAILFSDILVIPDAMKRNVRFTEGHGPEMDPIDEAGIGSLNGEEVVDYLRP
VLETVRRLREELPAETTLLGFCGAPWTVATYMIAGHGTPDQAPARLFAYKHARAFEHLLM
LLADVSADYLVAQIDAGADAVQIFDSWAGVLGEKEFEAFAIRPVARMIASVKSRRPHARI
IAFAKGAGYQLKTYRQKTGADAIGLDWSVPLAFAAELQKDGPVQGNLDPMRVVAGGRALE
EGIDDILQHLGNGPLIFNLGHGITPQADPEHVRLLVDRVRGGA
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
ttgagcgatacgggccgaaagatcatgagggttttgagtggcgagagcctctcccctcct
cctctctggctgatgagacaggcaggacgttatcttccggaatatcgggagacacgggca
aaggcagggagttttctcgatctctgctatacgcctgagcacgccgtcgaagtgacattg
cagccgatccgccgctatggcttcgatgcggccattctgttttccgatatcctggtcatt
ccagacgcaatgaagcggaatgtccggttcaccgagggccatggtccggagatggatccg
atcgatgaagccgggatcggcagtttgaacggcgaagaggttgtcgattatctcaggccg
gttctggagacggtgcgacggctgcgtgaagaactgccagcggagacgacgctgctcggc
ttctgcggggcgccatggacggttgcgacctacatgattgccggtcacggcacgccggat
caggcccctgcccgtctcttcgcctacaagcatgcccgcgctttcgagcatctgttgatg
ctgcttgccgacgtatcggccgattatctcgtcgcccagatcgatgccggcgccgatgcc
gtgcagatcttcgattcctgggcaggtgttctcggcgagaaggagttcgaggcgtttgcg
atcaggccggttgcgcggatgattgcttccgtcaaatcgcgacggccgcatgctcgcatc
atcgcttttgccaagggcgccggctatcagctcaagacctatcgccagaagacgggcgca
gatgcgatcggcctcgactggtcggtcccgctggcctttgcagccgaacttcagaaagac
ggaccggttcagggcaacctggatccgatgcgggtcgttgccggcggccgggcgctggag
gaaggcatcgatgatattctgcagcatctcggcaatggtccgttgatcttcaatctcggt
cacggcattacaccgcaggccgatcccgagcatgtgcgtctgttggtggatcgtgtgcga
ggcggggcgtga
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