Rhizobium johnstonii: pRL100134
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Entry
pRL100134 CDS
T00402
Symbol
gabD1
Name
(GenBank) putative succinate-semialdehyde dehydrogenase [NADP+]
KO
K00135
succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:
1.2.1.16
1.2.1.79
1.2.1.20
]
Organism
rle
Rhizobium johnstonii
Pathway
rle00250
Alanine, aspartate and glutamate metabolism
rle00310
Lysine degradation
rle00350
Tyrosine metabolism
rle00650
Butanoate metabolism
rle00760
Nicotinate and nicotinamide metabolism
rle01100
Metabolic pathways
rle01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
rle00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
pRL100134 (gabD1)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
pRL100134 (gabD1)
00310 Lysine degradation
pRL100134 (gabD1)
00350 Tyrosine metabolism
pRL100134 (gabD1)
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
pRL100134 (gabD1)
Enzymes [BR:
rle01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.16 succinate-semialdehyde dehydrogenase [NAD(P)+]
pRL100134 (gabD1)
1.2.1.20 glutarate-semialdehyde dehydrogenase
pRL100134 (gabD1)
1.2.1.79 succinate-semialdehyde dehydrogenase (NADP+)
pRL100134 (gabD1)
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Motif
Pfam:
Aldedh
Motif
Other DBs
NCBI-ProteinID:
CAK10357
UniProt:
Q1M815
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Position
pRL10:129385..130836
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AA seq
483 aa
AA seq
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MVNLKKTELLRDRCLIDGKWVAGSQNNIAVKNPATGEIVGTVPSLEAGDVEQAVVAAEVA
FRSWSALAAKERAAVLLRWFYLIIENADDLAALMTAEQGKPLSEARGEMLYAASFIEWFA
EEAKRVYGDIIPAPTTDKRILVFKQPIGVCAAITPWNFPAAMITRKAAPALAAGCTMVVK
PAEQTPLTALALGVLAEQAGIPAGVFQIVTGKSREIGKVLTESDIVKKLSFTGSTEVGRI
LMAQSAPTIKKLSMELGGNAPFIVFDDADLDAAVDGAVASKYRNAGQTCVCTNRIYVQSG
VYDVFAEKLAAKVSALKVGEGTQVDVTIGPLIDAEAIAKIEDHISDAIGKGAKVVVGGKR
HSLGGRFFEPTVLTGATQAMKIAREETFGPVAPLFRFETEEEALAMANDTEFGLAAYFYT
ENIRRTWRVAEALEYGMVGHNTGQISNEVAPFGGVKQSGLGREGSRYGIDDYLEIKYLCS
AIA
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atggtcaatctaaaaaaaacggaactcctgcgcgatcgatgcctgatagatggcaaatgg
gttgccggctctcagaacaacatcgccgtcaagaacccagcgacgggggagattgtcggc
accgttccttcactggaggcgggagatgttgagcaggcggtcgtagcggccgaagttgcc
ttccgttcgtggagcgcgcttgcagcgaaggaaagagcggccgtcctgctccgctggttc
tatctgataatagaaaacgcggacgatctggccgcgctgatgacggctgaacagggcaag
ccgctgtccgaagccaggggggaaatgctttacgccgcctcctttatcgaatggtttgcc
gaggaggcaaagagggtctatggggacatcatacccgcaccaaccaccgacaagcgcatc
ctggttttcaagcagccgatcggtgtctgcgccgcaatcacgccgtggaacttcccggca
gcaatgatcacacgcaaggcggcgcctgcgctggctgccggttgcaccatggtggttaag
ccggccgagcagacacccctcacggcgctggctctcggcgtactagccgaacaggcgggt
attcccgccggcgttttccagattgtgacaggaaaatcacgcgagatcggcaaggtgctg
acggaaagcgacatagtcaaaaaactgtctttcaccgggtcgaccgaggtggggcgaatt
ctcatggcgcagtctgcgccgacgataaagaaactgtccatggagctcggcggcaacgca
cccttcatcgttttcgacgacgccgacctcgatgccgccgtcgacggtgccgtcgcgtcg
aaataccgtaatgctggtcagacctgtgtctgcacaaaccgtatctacgtgcagtcgggt
gtttacgatgtcttcgctgaaaagcttgcggcgaaggtttctgcgctgaaagtcggtgaa
ggcacgcaggtggatgtaacaattggaccgctgattgatgctgaggccatcgccaagatc
gaggaccatattagcgatgcgatcgggaagggcgcgaaagtggtcgtaggtggcaagcga
cacagcctcggcgggagattcttcgaaccgactgtcctgacaggagcgacacaagcgatg
aagatcgcccgcgaggagaccttcgggccagtcgcgcctctcttccgctttgagacagag
gaagaggcgctcgctatggccaacgacacggaattcggattggctgcctatttttatact
gaaaacatccgccggacatggcgagtggccgaagcgctggaatacggcatggtgggtcat
aacaccggtcagatctcgaacgaggtggcgccatttggcggcgtcaagcagtccggcctc
ggacgggaaggctcccgttacggaatcgatgactatctggaaatcaaatatctgtgctcg
gccatcgcgtaa
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