Rhizobium johnstonii: pRL100148
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Entry
pRL100148 CDS
T00402
Symbol
thiC
Name
(GenBank) putative thiamine biosynthesis protein, pseudogene
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
rle
Rhizobium johnstonii
Pathway
rle00730
Thiamine metabolism
rle01100
Metabolic pathways
rle01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
rle00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
pRL100148 (thiC)
Enzymes [BR:
rle01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
pRL100148 (thiC)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC-associated
ThiC_Rad_SAM
Motif
Other DBs
NCBI-ProteinID:
CAK10371
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All DBs
Position
pRL10:complement(146116..146793)
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AA seq
225 aa
AA seq
DB search
MEPQTMNIAATPTHTTGPLPASRKIYIRGGVHPDICVPMREISLHPTSGEPPVVVYDSSS
PYTLEGAEIRIEQGLPSLRRDWVLARGDVEAYQDRHVRPEDNGFASGERLTPEVPTLRRP
LRAKDGEAGTQFAYARAGIITPEMEFIAIRENPGRKAQADAVVRDGESFGAHIPDHVTAE
FARREVAVGRAINHVAQCPPVTIERIRPALQIMSAVAQGAFIDSG
NT seq
678 nt
NT seq
+upstream
nt +downstream
nt
ttggaacctcaaaccatgaatatcgcagccaccccaacccacaccaccggccccttgccg
gcatccaggaagatctacattcggggcggcgtccatcccgacatttgcgtgccgatgcgc
gaaatcagcctacatccgacatcaggcgagccgcccgttgtggtctacgactcctccagc
ccctatacgctcgagggcgccgagatccgtatcgaacaggggctgccctcactgcgacgc
gactgggttctcgcccgcggcgacgtcgaggcctatcaggaccgccatgtccgtcccgaa
gacaacggctttgccagcggcgaaaggctgacgcccgaagttcccacgctacgccggccg
ctacgcgcaaaggatggcgaggccggcacccagtttgcctatgcgcgcgccggtatcatc
acgccggaaatggagttcatcgccatccgcgaaaaccccggccgcaaggcgcaggcggat
gccgtagtccgcgacggcgagagcttcggcgcgcatattccggatcatgtgacggcggaa
ttcgcccggcgggaagtggcggtgggtcgggcgatcaaccatgtggcccagtgcccgcca
gtcaccatcgaacgaatacgccccgctctgcagatcatgagcgccgtcgcccaaggcgcg
ttcatcgactccggttga
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