Rhizobium johnstonii: pRL100171
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Entry
pRL100171 CDS
T00402
Symbol
rhiC
Name
(GenBank) putative rhizosphere induced protein
KO
K20270
rhizosphere induced protein
Organism
rle
Rhizobium johnstonii
Pathway
rle02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rle00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
pRL100171 (rhiC)
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GFIT
Motif
Pfam:
DUF2556
Motif
Other DBs
NCBI-ProteinID:
CAK10395
RhizoBase:
pRL100171
UniProt:
Q1M7Y2
LinkDB
All DBs
Position
pRL10:171358..171807
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AA seq
149 aa
AA seq
DB search
MTATLRAFGWLAAFALTVTFAQGAAAEEQQKGKVGAKPVETGVVIRGVTLAGPVGNPGTS
TGKTCDFSGEPVDPSGRLEGASVNCRPNGNQANTTPGLPARFNAYCMINAPVKSARLIQA
ARPENANHCDLSGITPKDATGQFGGAVWR
NT seq
450 nt
NT seq
+upstream
nt +downstream
nt
atgactgctactttgagagctttcggatggctagctgctttcgctctgaccgtcacgttc
gcgcagggtgccgcggctgaggagcagcaaaaaggcaaggtgggggcgaagcccgtagaa
actggcgtcgtgatccgcggcgtcacgcttgccggtccggttggaaatccgggaacgtca
accgggaaaacatgcgacttcagcggtgagcccgtggatccatcggggcgtttggagggg
gcaagcgtcaactgcaggccaaatggcaaccaggcgaatacaacgccagggctacccgca
cgctttaacgcgtattgcatgataaatgcgccggttaaaagtgcgcggctgatccaagct
gcccgaccagaaaatgccaaccactgcgatctgtcggggatcaccccaaaagacgcgact
ggtcaattcgggggggccgtctggcggtag
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