Rhizobium johnstonii: pRL100178
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Entry
pRL100178 CDS
T00402
Symbol
nodT
Name
(GenBank) putative nodulation protein
KO
K18904
outer membrane protein, multidrug efflux system
Organism
rle
Rhizobium johnstonii
Brite
KEGG Orthology (KO) [BR:
rle00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rle02000
]
pRL100178 (nodT)
Transporters [BR:
rle02000
]
Other transporters
Pores ion channels [TC:
1
]
pRL100178 (nodT)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
HMUD2
TMEM247
Motif
Other DBs
NCBI-ProteinID:
CAK10402
UniProt:
Q1M7X6
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All DBs
Position
pRL10:complement(177479..178927)
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AA seq
482 aa
AA seq
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MHSFRLAAAVLPLLLSSCMLGPDHAPPETPLPEKFSEGAKQSAGDVAVSAWWDSFSDRTL
NQYVASGLDENLSVQQALERVNAAAADVTIAGAGGLPKASHTTSGEIGKGGDITSTQNIS
SVQLSLTWLLDVFGQYRRSTESALASLDSAHAAVDAAKLALIKDLVSSYIDARYYQQRVS
ISRANLKSRQETYDFTNLQVEAGAASRQDVLQAEGLVRSTIAEIPRLELNFRVSAHHIAA
LLALPSETVIKQLQKSEGQPVYRGKINAGIPADLIRNRFDIRQAERDLAAATAQIGVAEA
QLYPAITLSGSITPSYIKQRGRHGGILKWSFGPSLDLPILDGGRLRANVETSKSDAAAAY
ISWKLTVLTAVQEVEDALTAVRRDVHTENSRRRQVETIEEALKLSTASYTDGASSLLDVL
EAQRQVSSAQASLAAAIQQLAKDHVRLNVAIRGGFAAPKVASPREASTVAAANANIQSAH
SP
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
ttgcattcgttccgtctggccgctgcggtgttgccgctacttttgtcatcttgcatgctc
gggcccgaccatgcaccgccggaaacgcctttgccggagaagttttccgagggtgcaaaa
cagagcgccggcgatgttgcggtgtcggcgtggtgggattcgttttcagatcgtacgctc
aaccagtacgttgcctccggcctggatgagaacctcagtgttcagcaggcgctcgaaagg
gttaatgccgccgccgcggacgtcaccatcgctggcgccgggggccttcccaaggcatca
cacacgacaagcggcgagatcggcaaagggggagatatcacgagcacacagaatatctcc
agcgtgcaactatcgttgacctggctgctggacgtattcggtcagtaccggcgcagcact
gaaagcgcactggcttctcttgattctgcgcatgcggctgtcgacgccgcaaagctagct
ctaatcaaagatcttgtttcctcctacatcgacgcccggtactaccagcagcgcgtctcg
atttcccgagcgaacctgaagtcccgccaggagacctacgatttcacgaatcttcaagtc
gaagcgggagcggcttcccggcaggatgtcttgcaagccgaaggacttgtccgatcgacg
attgccgaaataccaaggctagaactgaattttcgcgtgtcggcgcatcacattgcggcc
ctcctcgctttgccgtcggaaacagtgatcaagcaactgcagaaaagtgaagggcagccg
gtctatcgcggaaagatcaatgccggcattcccgccgatcttattcgcaatcgattcgat
attcgccaggctgaacgggatctcgccgccgcgactgcacagatcggcgtggcggaagca
cagctttaccccgcgataacgctctccggctcgatcaccccttcctatatcaagcagcgc
ggccgtcacgggggtatcttgaaatggtccttcgggccgagccttgacctcccaattctg
gacggcggccgtttgcgggcaaacgtggagacttctaaatcggacgccgcagcagcctac
ataagctggaaattaaccgtcctgacagctgtgcaggaagtcgaggacgctttgacagcc
gtccgacgcgacgttcacacagagaactcacgtcgcaggcaagtagaaacgatcgaagaa
gcactgaagctttcgacggcctcgtacacggatggcgcctcttctctcctcgatgttctc
gaagcgcaaaggcaggtgtccagcgctcaggcgagcctcgctgcggcgatccagcaactg
gccaaggatcacgtgcggttgaatgtagcaatccgcggtggttttgcggctcccaaagtc
gcgtcacccagggaggcctcgacggttgcagccgcaaatgcaaacatccaatccgcacat
tcgccatag
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