Rhizobium johnstonii: pRL100249
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Entry
pRL100249 CDS
T00402
Symbol
gtsB
Name
(GenBank) putative spermidine/putrescine transport system ABC transporter permease protein
KO
K02054
putative spermidine/putrescine transport system permease protein
Organism
rle
Rhizobium johnstonii
Pathway
rle02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rle00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
pRL100249 (gtsB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rle02000
]
pRL100249 (gtsB)
Transporters [BR:
rle02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
pRL100249 (gtsB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_1
Motif
Other DBs
NCBI-ProteinID:
CAK10476
UniProt:
Q1M7Q3
LinkDB
All DBs
Position
pRL10:253686..254558
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AA seq
290 aa
AA seq
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MSTYSDASAAIAPLPKARKATGFGGVLPALAFVAIFFIAPVAVLLLRSVLEPVPGFGNYA
QLIGSATYLKIFANTFIVSGLVTAISLLIGFPVAWALAIMPGRLTSVIFAILLLSMWTNL
LARTYAWMVLLQRTGLINKMLIGMGLIDKPLALVNNLTGVTIGMTYIMLPFIILPLYGVI
KKIDPSTLQAAALCGANRWQCLTRVLLPLAMPGMAAGALMVFVMSLGYFVTPSLLGGTAN
MMLAELIAQFVQSLVNWGMGGAAALVLLVVTLLLYAVQLRFLGNQNPGGR
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacatatagcgatgcctccgctgcaattgcgcccctgccaaaggcgcgcaaggca
acagggtttgggggggtccttccggcgctcgccttcgtggcgatctttttcatcgcgccg
gtggcggtactcctgctgcgcagcgtgctggaaccggtgccgggctttggaaactatgcg
cagctgatcggatccgcgacctatctcaagattttcgccaacaccttcatcgtctcgggt
ctcgtcaccgcgatttcgctgctgatcggatttcccgttgcctgggcgctggcaatcatg
cccgggcgcctcacctcggtaatctttgcgatcctgctcctgtcgatgtggaccaacctg
ctggcccgcacctatgcctggatggtgcttttgcagcggacggggctcatcaacaagatg
ctgatcggaatggggctgatcgacaaacctttggcactggtcaacaacctgaccggggtc
accatcggcatgacctatatcatgctgcccttcatcatcctgccgctctacggcgtgatc
aagaagatcgacccgtcgaccctgcaggcggcagcactttgcggcgccaatcggtggcag
tgcctgacccgtgtcctgctgcccttggccatgcccggcatggcggctggcgcccttatg
gtcttcgtcatgtcgcttggttatttcgtcacgccgtcgcttctcggcggcactgcgaac
atgatgctcgcagagctgattgcgcaattcgtgcagtcgctggtcaattggggaatggga
ggtgctgcggcgctggttctcctcgtggtgaccctgctgctttatgccgtgcagctgcgc
ttcctcggcaaccaaaacccgggagggcgttga
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