Rhizobium johnstonii: pRL100306
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Entry
pRL100306 CDS
T00402
Symbol
lpdV
Name
(GenBank) putative dihydrolipoyl dehydrogenase
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
rle
Rhizobium johnstonii
Pathway
rle00010
Glycolysis / Gluconeogenesis
rle00020
Citrate cycle (TCA cycle)
rle00260
Glycine, serine and threonine metabolism
rle00280
Valine, leucine and isoleucine degradation
rle00310
Lysine degradation
rle00380
Tryptophan metabolism
rle00620
Pyruvate metabolism
rle00630
Glyoxylate and dicarboxylate metabolism
rle00640
Propanoate metabolism
rle00670
One carbon pool by folate
rle00785
Lipoic acid metabolism
rle01100
Metabolic pathways
rle01110
Biosynthesis of secondary metabolites
rle01120
Microbial metabolism in diverse environments
rle01200
Carbon metabolism
rle01210
2-Oxocarboxylic acid metabolism
rle01240
Biosynthesis of cofactors
Module
rle_M00009
Citrate cycle (TCA cycle, Krebs cycle)
rle_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
rle_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
rle_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
rle00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
pRL100306 (lpdV)
00020 Citrate cycle (TCA cycle)
pRL100306 (lpdV)
00620 Pyruvate metabolism
pRL100306 (lpdV)
00630 Glyoxylate and dicarboxylate metabolism
pRL100306 (lpdV)
00640 Propanoate metabolism
pRL100306 (lpdV)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
pRL100306 (lpdV)
00280 Valine, leucine and isoleucine degradation
pRL100306 (lpdV)
00310 Lysine degradation
pRL100306 (lpdV)
00380 Tryptophan metabolism
pRL100306 (lpdV)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
pRL100306 (lpdV)
00670 One carbon pool by folate
pRL100306 (lpdV)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rle04147
]
pRL100306 (lpdV)
Enzymes [BR:
rle01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
pRL100306 (lpdV)
Exosome [BR:
rle04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
pRL100306 (lpdV)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
Pyr_redox_3
NAD_binding_8
HI0933_like
GIDA
FAD_oxidored
FAD_binding_2
DAO
UDPG_MGDP_dh_N
FAD_binding_3
AlaDh_PNT_C
TrkA_N
Lys_Orn_oxgnase
NAD_binding_7
Lycopene_cycl
3HCDH_N
Motif
Other DBs
NCBI-ProteinID:
CAK10531
UniProt:
Q1M7J8
LinkDB
All DBs
Position
pRL10:319624..321021
Genome browser
AA seq
465 aa
AA seq
DB search
MKEIVCKLLVIGAGPGGYVCAIRAGQLGVDTVIVEAGKPGGTCLTVGCIPSKALIHAAEE
FDATQKMLAGKNPMGIRVEGASIDLGRTIAWKDGIVGRLTSGVSGLLQKARVKIVHGRAH
FRDGKTVEVETETGQQIIRAETVVIATGSDPVELSNLPFGGRVISSTEALSLTELPKKLV
VVGGGYIGLELGTAFSKMGSDVTVVEATPQVLPQYDAELVRPVMRKLTEGSIRLLTGAKA
IGLADNGEALIVEAADGRRESLPADRILVTVGRRPRTAGSGLEELDLDRAGPYLRIDDRC
RTSMRGIYAIGDVTGEPMLAHRAMAQGEMVAEIIAGKKRAWDKRCIPAICFTDPEIVSAG
LSPADAKAQGYEIRTGQFPFSANGRAMTMLSEEGFVRIVARADTNLVLGLQAVGAGVSEL
SAAFALAIEMGARLEDIAGTIHAHPTRSEAVMEAALKALGSALHI
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgaaagagatcgtctgcaagctcctcgtcatcggcgccggtccgggaggttatgtctgc
gccattcgcgccgggcagctcggcgtcgatactgttatcgtcgaggccggcaagccgggc
ggcacctgcctgacggtcggctgcattccctccaaggcgttgatccatgcggccgaggaa
ttcgatgcgacgcaaaagatgcttgccggcaaaaacccgatgggcattcgcgtcgagggc
gcctcgatcgatctcggcaggacgattgcctggaaggacgggatcgtcggccgcttgacg
agcggtgtttcggggctgctgcagaaggcgcgggtcaagatcgtccacggccgagcccat
ttccgcgacggcaagacggtggaggtggagacggaaaccggccagcagatcatccgcgcc
gagaccgtggtgatcgccaccggttcggatccggtggagctttcgaacctgcctttcggc
ggccgcgtgatttcctcgacggaggcgctgtcgctgacggagctgccgaaaaaactcgtc
gtggtcggcggcggttatatcgggctggagctcgggaccgccttttccaaaatggggtct
gatgtgacggtcgtcgaggcgacgccgcaggtgctgccgcaatatgatgccgaactggtg
cggcccgtcatgcgcaagctgactgaaggcagtatccggctgttgacaggcgcgaaggcg
atcggccttgccgacaacggggaggctctgatcgtagaagcggctgatggccgccgcgag
agcctgccggcggaccgcatcctcgtcaccgtcggccgccgtccaagaaccgcaggatcc
ggtctcgaagagctcgatctcgatcgtgccggcccttatctgaggatcgacgaccgttgc
cgcacctcgatgcgcggcatctatgcgatcggcgatgtgaccggcgagccgatgcttgcc
catcgggccatggcgcaaggcgagatggtggcggaaatcatcgccgggaagaagcgggcc
tgggacaagcgatgcatccccgccatctgcttcaccgacccggagatcgtcagcgccggc
ctgtcgccggccgacgcgaaggcgcaaggttatgaaatccgcaccggccagtttccgttc
agcgccaacggacgggcaatgacgatgctgtccgaagaaggcttcgttcgcatcgtggcc
cgggccgataccaatctcgtgctcggcctgcaggctgtaggggcgggggtctccgagctc
tcggcggcttttgcgctcgccatcgagatgggcgcgcgcctggaagacatcgccggcacc
atccatgcgcatccgacccgcagcgaagcggtgatggaggcggcgctaaaggctttggga
agcgctctgcatatctga
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