Rhizobium johnstonii: pRL100309
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Entry
pRL100309 CDS
T00402
Name
(GenBank) putative calcium-binding cadherin-like RTX protein Exported via PrsDE Type I secretion
Organism
rle
Rhizobium johnstonii
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Gene cluster
GFIT
Motif
Pfam:
HemolysinCabind
Cadherin
Cadherin_CELSR2_9th
DIPSY
Motif
Other DBs
NCBI-ProteinID:
CAK10534
UniProt:
Q1M7J7
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Position
pRL10:322478..324247
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AA seq
589 aa
AA seq
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MALNILNTNGATITKTGAEFESYDVIRNSEINPLLSVNLVISDSGTVDLADELGSGSANV
TGSNGDNAITTGAGNDNIDGGEGADTLNGGAGNDLLRGGNGNDTLDGGDGNDWLAGRDGN
DILNGGDGNDQIIDDVGNDVIRGGLGNDTISDGDAGGRNPEVFDINAGDGDDAISVKGQG
SGTIDGGAGIDTLQASELRGLTIKNIEVLETVGYWVAGSSAQFESFDTIVWSTDPFHNFN
PALAVTDSAHLDLSDELGDRGAFVTGYVSGVDVKTGGGSDEFTGTDGNDIFDGSGGNDII
NGKAGNDKLTGGAGNDTINGGAGIDTAIFSGNFVNYSFALNNSDHILTSALEGKDTLTDV
EFVRFADGVYDFAKGTFTPDANAAPINLQLSKTSVSESTPTWTTLGLLSAHDADGDKLTY
KLIDGADDHFRINGNRIVTSKALDYETAKSYTIKVAVSDGKVTVEKDITINVLDVNEVPV
NKAPTNLAFSRGSVSENIAIGTSVGLLSAVDPEGSVVKWRLTDDADGIFKLVGNKIQTKA
AIDFESTHSLTFTAEAYDAAGNATSHDFTVAVKDVFEPSFSSLSHEALI
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atggccttgaatattctgaatacgaacggcgcaacgatcaccaagaccggcgccgagttc
gaatcttacgacgtcatccgcaattccgaaatcaatcctctcctctcggtcaatctggtc
atctccgattccgggacggttgatcttgctgacgaactgggctctggctccgcgaatgtg
acgggctcaaacggcgacaatgcgatcacaacaggcgcaggcaacgataacatcgatggc
ggcgagggcgcagacacgctgaatgggggcgccggaaacgatctgcttcgtggcggtaat
ggcaatgacacgcttgacggcggtgatggcaatgactggctcgcgggcagagatggcaat
gatattctgaatggtggtgacggcaatgaccagattatagacgacgtcggaaatgacgtc
atcagaggcggcttgggcaacgatacgatttccgatggtgacgccggcggccgtaaccct
gaggtcttcgacatcaacgcgggcgacggcgacgatgccataagcgtgaaggggcagggc
tccggaacaatcgacggcggcgcggggatcgatactctccaagcctctgagctaagaggc
ctgacgatcaagaacattgaagtccttgaaacggtgggatattgggttgccggttcaagc
gcgcagttcgaaagctttgacacgatcgtgtggtcgaccgatccgttccacaattttaac
cccgcattggcagtgacagacagcgcccacctcgatctttccgacgaactgggagatcgc
ggggctttcgttaccggctatgtctctggcgttgacgtcaagaccggcggtggtagcgac
gagtttacaggcaccgatggcaacgacattttcgacggcagcggcggcaacgacatcatc
aatggcaaggccggcaatgacaagttgaccgggggcgccggcaacgacaccatcaatggc
ggcgccggcatcgataccgcgatcttctcaggtaatttcgtcaattattccttcgcattg
aacaacagcgatcacattctgacgagcgccctggagggcaaggacacgctgacggacgtc
gaattcgtgcgctttgccgacggcgtctacgatttcgccaagggaaccttcacgcccgac
gctaatgccgcacccatcaatctccagctctcgaaaacctctgtctccgagagcacccca
acttggaccaccctcggcctactcagcgctcacgatgctgacggtgacaaactcacctac
aagctgatcgacggcgccgacgatcacttccggatcaacggcaaccgcatcgtcacctcc
aaggctctggattacgagacggcgaagtcgtacacgatcaaggtggctgtctccgacggc
aaggtcacggtcgaaaaggacatcacgatcaacgtgctcgacgtcaacgaagtacctgtg
aacaaggcgccgaccaatctcgccttctcgcgcggctcggtctccgagaatatcgcgatc
ggcacttcggtcggccttctctcggcggtcgatccggagggcagcgtggtgaagtggcgg
ctgacggatgatgctgacggcatcttcaagctcgtcggcaacaagatccagacaaaggcg
gcgatcgatttcgaaagcacccacagcctgactttcaccgccgaagcctatgacgctgct
ggaaacgccacgagccacgatttcacggtggccgtgaaggacgtcttcgagccgtccttt
tcgagcttgtcgcatgaggcgttgatctaa
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