Rhizobium johnstonii: pRL100396
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Entry
pRL100396 CDS
T00402
Name
(GenBank) conserved hypothetical exported protein
KO
K10439
ribose transport system substrate-binding protein
Organism
rle
Rhizobium johnstonii
Pathway
rle02010
ABC transporters
rle02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
rle00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
pRL100396
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
pRL100396
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rle02000
]
pRL100396
Transporters [BR:
rle02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Ribose transporter
pRL100396
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
Mur_ligase
Motif
Other DBs
NCBI-ProteinID:
CAK10622
UniProt:
Q1M7B0
LinkDB
All DBs
Position
pRL10:412471..413568
Genome browser
AA seq
365 aa
AA seq
DB search
MKRRTLLQATVATVAVMLSMPAWADSMADAKAVVEKYASKVSAWDGPTSGPKGAAGKNIV
ILAGDMKNGGILGVVNGVQEAAGALGWTVKALDGAGSIGGRTAAFGQAMALKPDGIIING
FDAVEQKPAMEAAKAAGIPMVSWHAASAVGPVPEVGVFANVTTDAMEVSKSAADWAFADA
AGKPGVIIFTDSTYAIAIAKADRMKKEIEDLGGTVLEYVDTPIAETSQRMPQLTTSLLQK
YGAKWTHSLAINDLYYDFMGPSLASAGIAGDGKPVNVAAGDGSESAYQRIRAKQFQAVTV
AEPLNLQGWQLVDELNRAFAKAPWSGYVSPLHVVTSENVEFDGGPKNSFDPDNGYRDQYK
KIWGK
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgcagaacattattgcaggcaacggtcgcaaccgtcgccgttatgctcagcatg
ccggcatgggccgattcgatggccgacgccaaagccgtggtcgaaaagtatgcttccaag
gtgagcgcctgggatggcccgacgagcggccccaagggcgctgccggaaagaacatcgtc
attcttgccggtgatatgaaaaacggcggcatcctcggcgtggtcaatggcgttcaggaa
gcggcaggcgcgctcggctggacggtgaaggctcttgacggcgccggttcgatcggcgga
cggaccgcggcgttcggccaggccatggcgctgaagccggatggcatcatcatcaacggc
tttgacgcggtcgagcagaagccggcgatggaagcggccaaggctgccggcattccgatg
gtttcctggcacgccgcctcggccgtcggtccggttcccgaagtcggtgtcttcgcaaac
gtcaccactgacgcgatggaagtgtcgaagtctgcagcggattgggccttcgccgatgcc
gccggcaagccgggcgtcatcatcttcaccgactccacctatgcgatcgcgattgccaag
gccgatcgcatgaagaaggagatcgaggatctcggcggcaccgtgctcgaatatgtcgac
acgccgatcgccgaaacctctcaacgcatgccgcagctgaccacatcgcttctgcagaag
tatggcgcgaagtggacgcattcgctggcgatcaacgacctctattacgatttcatggga
ccttcgctcgcttcggccggtattgccggtgatggaaaaccggtgaacgtcgcagccggc
gacggttcggagagcgcctatcagcgtatccgcgccaagcagttccaggccgtcacggtc
gccgagccgctcaacctccagggctggcagctcgtcgacgaattgaaccgcgcctttgcg
aaagctccatggtccggctacgtgtcgccgctccatgtggtgaccagcgagaacgtcgag
tttgacggtggaccgaagaatagcttcgatcccgacaacggctatcgcgatcaatacaag
aaaatctggggcaaatag
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integrated database retrieval system
