Rhizobium johnstonii: pRL100415
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Entry
pRL100415 CDS
T00402
Name
(GenBank) putative substrate-binding component of ABC transporter
KO
K10439
ribose transport system substrate-binding protein
Organism
rle
Rhizobium johnstonii
Pathway
rle02010
ABC transporters
rle02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
rle00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
pRL100415
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
pRL100415
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rle02000
]
pRL100415
Transporters [BR:
rle02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Ribose transporter
pRL100415
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
Peripla_BP_6
NAD_binding_3
Stk19
PucR
Motif
Other DBs
NCBI-ProteinID:
CAK10641
UniProt:
Q1M791
LinkDB
All DBs
Position
pRL10:432085..433158
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AA seq
357 aa
AA seq
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MKNLENGISASLRRRLLAGAAAAAALLVFSAGTASAAANCIKGDRKAPYTIGWANIYSVP
TWMKQTEGTITAEVEELKKAGLVRDLMITDAQGNAQTQIQHIQSMIDANVDAIVVIAGSS
NALDRVISDACDKGIAVVNFDSLVNTDKVTAKINTDSNEWGATAAKWMVSQLGGKGKIII
MNGPAGISVSDDRRKGAQPVLDANPGLQVITETNTEYNVAPAQEAMTSLLFANPEIDGVL
SLGGALSAGSVLAFERQGRDQVPTTGENARQFLELWKEKGLKGWATMQPNWLGALSVYTA
VQALEGKDVPAFVKVPLPVIDDSTIGSYLARADKFPADGYIYSDYDKALFDKLLATK
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atgaagaatcttgaaaacggcatttccgcttcgctgcgccgccgccttctcgcgggcgct
gccgccgctgcggcactcctcgtcttttcggccggcacggcctcggccgccgccaactgc
atcaagggtgacaggaaggcgccctatacgatcggctgggcaaacatctactcggtgccg
acctggatgaagcagaccgaaggcaccatcacggctgaagtggaggagctgaagaaggcg
ggcctggtgagagatctgatgatcacggacgcgcagggcaatgcccagacgcagatccag
catatccagtcgatgatcgacgccaatgtcgacgccatcgtcgtgatcgccggttcctcc
aacgcgctcgaccgcgtcatatcagatgcctgcgacaagggcatcgccgtcgtgaatttc
gacagccttgttaacaccgacaaggtgacggcgaagatcaacaccgattccaacgaatgg
ggcgcgaccgctgccaagtggatggtcagccagctcggcggcaagggcaagatcatcatc
atgaacggcccggccggcatttcggtgagcgacgaccgccgcaagggcgcccagccggtc
ctcgacgccaatcccggtctccaggtgatcaccgaaacgaacacggaatataacgtcgcc
ccggcacaggaagcgatgaccagcctgctcttcgccaatcccgaaatcgacggcgtgctg
tcgctcggcggcgcgctatcggccggctccgtcctcgccttcgagcgtcagggccgcgat
caggtgccgactacaggtgaaaacgccaggcagttcctggaactctggaaggagaaggga
ctgaagggctgggcgaccatgcagcccaactggctcggtgcactttccgtttacaccgcc
gtgcaggcgctggaaggcaaggacgttccggccttcgtcaaggtgccgctgcctgtcatc
gacgacagcacgatcggcagctacctcgcccgggccgacaagttcccggctgacggctat
atctactcggactacgacaaggcgctcttcgacaagctgcttgccaccaagtaa
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