Rhizobium johnstonii: pRL110087
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Entry
pRL110087 CDS
T00402
Symbol
pcaH1
Name
(GenBank) putative protocatechuate 3,4-dioxygenase beta chain
KO
K00449
protocatechuate 3,4-dioxygenase, beta subunit [EC:
1.13.11.3
]
Organism
rle
Rhizobium johnstonii
Pathway
rle00362
Benzoate degradation
rle01100
Metabolic pathways
rle01120
Microbial metabolism in diverse environments
rle01220
Degradation of aromatic compounds
Brite
KEGG Orthology (KO) [BR:
rle00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
pRL110087 (pcaH1)
00624 Polycyclic aromatic hydrocarbon degradation
pRL110087 (pcaH1)
Enzymes [BR:
rle01000
]
1. Oxidoreductases
1.13 Acting on single donors with incorporation of molecular oxygen (oxygenases)
1.13.11 With incorporation of two atoms of oxygen
1.13.11.3 protocatechuate 3,4-dioxygenase
pRL110087 (pcaH1)
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Motif
Pfam:
Dioxygenase_C
PCDO_beta_N
CarboxypepD_reg
SdrD_B
Motif
Other DBs
NCBI-ProteinID:
CAK03029
UniProt:
Q1M6V0
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Position
pRL11:complement(101716..102465)
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AA seq
249 aa
AA seq
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MSERPNRKPETGGFFARDRAWHAPALTPGYKTSVLRAPQRALLSLDGTISETTGPVFGHS
MIGELDNDLILNYAQPGESAIGERIIVHGRVLDERARPVAGALVEFWQANAGGRYRHKKE
TYLAAIDPNFGGCGRAITDEDGHYHFRTVRPGAYPWPNGINDWRPAHIHFSIFGHGFAQR
LITQMYFEGDPMIWKCPIVGTIPDKAAIEQLIAPLDWGNTIPMDSRAYKFDIVLRGRRST
MFENKLEGN
NT seq
750 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaacgaccgaaccgcaagcccgagaccggcggcttcttcgcccgcgaccgcgcc
tggcatgcgccggcgctgacgccgggctacaagacctccgtgctgcgcgcgccgcagcgc
gcgctgctgtcgctcgatggcacgatttccgagaccaccggtccggtcttcggccattcg
atgatcggcgaactcgacaacgacctgatcctgaattacgcgcagcccggcgaaagtgcc
atcggcgaacgcatcatcgtccatggccgtgtgctcgacgagcgcgccaggccggttgcc
ggcgccttggtcgagttctggcaggccaatgccggcggccgctatcgccacaagaaggaa
acctatctggcggcgatcgacccgaatttcggcggctgcggccgcgccatcaccgacgag
gacggccattatcacttccgcaccgtccgccccggcgcctatccctggccgaacggcatc
aacgattggcgtcccgcccatatccatttctcgatcttcggacatggctttgcccagcgc
ctgatcacccagatgtatttcgagggcgatccgatgatctggaaatgtccgatcgtcggc
acgatccccgacaaggcggcgatcgagcagctgatcgcgccgctcgactggggcaacacc
atcccgatggattcacgcgcctataaattcgatatcgtgctgcgcggccgccggtcgacg
atgttcgaaaacaaattggagggcaactga
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