Rhizobium johnstonii: pRL110169
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Entry
pRL110169 CDS
T00402
Name
(GenBank) putative substrate-binding component of ABC transporter
KO
K10439
ribose transport system substrate-binding protein
Organism
rle
Rhizobium johnstonii
Pathway
rle02010
ABC transporters
rle02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
rle00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
pRL110169
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
pRL110169
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rle02000
]
pRL110169
Transporters [BR:
rle02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Ribose transporter
pRL110169
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
Motif
Other DBs
NCBI-ProteinID:
CAK03115
UniProt:
Q1M6L8
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All DBs
Position
pRL11:complement(182514..183536)
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AA seq
340 aa
AA seq
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MREVSMHATQNRYRTHSRSVSGSIFRSSALTLTALLFAGSAMAKDLTFGYVPASLEYPYN
VMTAKGFEEAAKEKGVKTVVIDPRGSVEKQGNSLDDLLSQKVDAIGFLPLDSVVAEGFVD
KVSDAKVPIVAIALQVGDSAKRQLKDPYPGLSALVATDNYQSGVVAGEMAAGVLPKDKTA
KIGIVMGDPAYTIVKLDTDGFKAALDKAGAKYTIVAEQPTNWTPDEGEAVCQNFLTAHPD
IDLIYSHADDMAIGCARAIDASASKPKLIATGGGSKLGHDAILAGEMYGSVCTRPQLLGK
LMFDALYEAATKPETPKGRFVTYDMPPITKETIDSCPEQW
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgagggaggtttccatgcacgctacgcagaatagataccgcacacactccaggtccgta
tcaggctcgattttccggtcgtcagctttgacgctaacagccctgctcttcgccggttcc
gcaatggcgaaagacctgaccttcggctacgttccggcgagcctcgaatatccctacaac
gtcatgacggccaagggcttcgaggaggcagccaaagaaaagggcgttaaaacagtcgtc
attgacccgcgcggcagcgtagaaaagcaggggaactccctcgacgatctgctatctcag
aaggtcgatgcaattggtttcctcccgctcgactccgtcgtcgcggaagggtttgttgac
aaggtcagcgacgcaaaggtgccaatcgtagcgatcgctttacaggtcggcgattcagcg
aagcgtcaactgaaagacccctacccaggcctatcggccctggttgcaacggacaactat
cagtccggagttgttgctggcgagatggcagctggtgtgttgccaaaggacaagacagct
aaaattggcatcgtcatgggtgatccggcctacacgatcgtcaagctcgataccgacggt
ttcaaagccgcactggacaaggctggggcgaaatacaccatcgttgccgagcagccgacg
aactggacacccgatgaaggcgaagccgtttgccagaacttcctgacggctcatcctgac
atcgacttgatttacagccatgccgacgacatggcgatcggatgtgcacgcgcaatcgat
gcatcagcctcgaagccgaaactaatagcgaccggcggtggatctaaactcggccacgac
gcaatccttgccggggaaatgtatggctcggtctgcacgagacctcaacttctcggcaag
ctgatgtttgatgccctctacgaggctgcgacaaagccggaaactcccaaaggtcgcttc
gtgacttacgacatgcctccgatcacgaaggaaaccatcgactcctgccctgagcagtgg
tga
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