Rhizobium johnstonii: pRL110304
Help
Entry
pRL110304 CDS
T00402
Symbol
treX
Name
(GenBank) putative glycosylhydrolase
KO
K01214
isoamylase [EC:
3.2.1.68
]
Organism
rle
Rhizobium johnstonii
Pathway
rle00500
Starch and sucrose metabolism
rle01100
Metabolic pathways
rle01110
Biosynthesis of secondary metabolites
Module
rle_M00565
Trehalose biosynthesis, D-glucose 1P => trehalose
Brite
KEGG Orthology (KO) [BR:
rle00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
pRL110304 (treX)
Enzymes [BR:
rle01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.68 isoamylase
pRL110304 (treX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CBM_48
Alpha-amylase
Isoamylase_C
hDGE_amylase
Motif
Other DBs
NCBI-ProteinID:
CAK03253
UniProt:
Q1M683
LinkDB
All DBs
Position
pRL11:336967..339123
Genome browser
AA seq
718 aa
AA seq
DB search
MSFSFSELDFLKPELGAEYTGSGTHFAVFSAHAEQMELCLFSPDGKNEIARLPLPKREGD
IWSGYIAGVGPGTVYGYRAHGPYDPQAGHRFNPNKLLLDPYAKQVTGELKWDDALFGYQI
GEDDLSFDARDSAPFTVKGVVQDPDFDWAGEEAIRRPWPDTIIYEAHVRGLTMTHPKVPD
RLRGTFLGMCSDPIIDHLVKLGISAIELLPIQYFLDDRYLLENNLRNYWGYQTLGFFAPQ
SRYMSGDKITEIKTMVKKFHAAGIEVIMDVVYNHTAEGSEKGPTLSFRGLDNASYYILSP
DDPRHTYDTTGTGNTLNAANPMVMRMVLDSLRYWVGVMHIDGFRFDLASTLGRQDMEFDR
QGLFFGAIRQDPILAGVKLIAEPWDVGDGGYQVGGFPHPFREWNDKFRDDVRRFWKGDGG
MVSEISQRITGSAVQFNHSDRGATSSINLLSAHDGFTLMDTVSFDDKHNDANGEDNRDGH
SDNHSDNMGAEGVTDNEDINSLRARRRRNMMATLMLSQGVPMILAGDEVGNSQGGNNNAY
CQDNEIGWTDWSGLDDPFLDFCRQAVAFRKAHPVLRQERFLTGETAEDGRIEIAWYKPDG
GFMDEGAWNDDGLQVLGVYVSRSVHAPDTEEMDDLFLVFNAGGDCEVHLPVVNGLKQWSR
VLDTGSETASFEVREPENPVIVYAQSVAVFAPKGQTEPPKGATKAERRRWFQFGRRSK
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atgagcttttcattttcggaactcgacttcctcaagccggagctgggagcggagtatacg
ggttctggcacccatttcgcggtattctccgcccatgcggaacagatggagctctgcctc
ttctcgcctgacggaaagaatgagatcgcccggctgccattgccgaaacgcgaaggcgac
atatggtcgggttatatcgccggcgtcggtccgggcaccgtctacggttatcgcgcccac
ggcccctatgacccgcaagccggacatcgcttcaatccgaacaagctcctgctcgacccc
tatgccaaacaggtgacgggcgagcttaaatgggacgacgcgctgttcggctaccagatc
ggtgaggacgacctttccttcgacgcacgtgacagcgcgcccttcacggtcaagggcgtg
gtgcaggatccggacttcgattgggcgggtgaagaggcgatccgccgtccctggcccgac
accatcatctacgaggcgcatgtgcgcggactgacgatgacgcatccgaaggtgcccgac
cggctgcgcggcacctttctcggcatgtgcagcgatccgatcatcgaccatctcgtcaag
ctcggcatctcggcgatcgagctgctgccgatccagtattttctcgacgatcgttatctc
ctggaaaacaacctacgcaattattggggctatcaaacactcggcttcttcgcgcctcaa
tctcgttacatgtccggcgacaagatcaccgaaatcaagaccatggtgaagaagttccat
gccgccggcatcgaagtcatcatggacgtggtctacaatcatacagccgagggcagcgag
aaaggaccgacgctgtccttccgcgggctcgacaatgccagctattacatcctctcccct
gatgatccgcgccacacctacgatacgacgggcaccggcaatacgctgaatgccgccaat
cccatggtgatgcgcatggtgctcgacagcctgcgctattgggtcggcgtcatgcatatc
gacggcttccgtttcgaccttgccagcacactcggccgccaggatatggaattcgaccgg
cagggcctgttcttcggcgccatccgccaggatccgatccttgccggtgtcaagctgatc
gccgagccctgggacgtgggcgatggcggctatcaggttggcggctttccgcatcccttc
cgtgagtggaacgacaagtttcgtgacgacgtgcgtcgcttttggaagggcgatggcggc
atggtctcggagatctcgcaacgcatcaccggctcggcggtacagttcaaccactcggat
cgcggcgcgacctcatcgatcaatctgctgtcggcccatgacggcttcacgctgatggac
acggtttccttcgacgacaagcataatgacgcgaacggcgaggataaccgggacggacat
tcggacaaccattcggacaacatgggtgccgaaggcgtgacggataacgaggacatcaac
agccttcgggcgcggcggcgccgcaacatgatggcgacgctgatgctctcccagggcgtt
ccgatgatccttgcaggcgatgaggtgggcaacagccagggcggcaacaacaacgcttat
tgccaggacaacgagatcggctggacggattggtcggggctcgacgaccccttcctcgat
ttctgccggcaggccgtcgccttccgaaaggcccatccggtcttgcggcaggagcggttc
ctgaccggagagacagccgaggacgggcgcatagagatcgcctggtacaaaccggacggc
ggtttcatggacgagggggcctggaacgacgacggtttgcaggtactcggcgtctacgtc
tcgaggagtgtgcatgcaccggacaccgaggagatggacgacctcttcctcgtcttcaat
gcaggtggcgactgcgaagttcacctgcccgtggtgaatgggctgaaacagtggtcgagg
gttctcgacacgggctcggagacggcttccttcgaggtgcgcgagccggagaatccggtc
atcgtctatgcccagagcgtggcggtcttcgcgccgaagggacaaaccgagccgccgaaa
ggcgcgacaaaagccgagcgtcgccgctggttccagttcggccgcaggagcaagtaa
DBGET
integrated database retrieval system
