Rhizobium johnstonii: pRL110412
Help
Entry
pRL110412 CDS
T00402
Symbol
rhaT
Name
(GenBank) ABC protein from rhamnose transporter
KO
K10562
rhamnose transport system ATP-binding protein [EC:7.5.2.-]
Organism
rle
Rhizobium johnstonii
Pathway
rle02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
rle00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
pRL110412 (rhaT)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rle02000
]
pRL110412 (rhaT)
Transporters [BR:
rle02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Rhamnose transporter
pRL110412 (rhaT)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
AAA_29
SMC_N
RsgA_GTPase
AAA_15
AAA_23
AAA_22
TsaE
KAP_NTPase
AAA_16
AAA_30
MMR_HSR1
Motif
Other DBs
NCBI-ProteinID:
CAK03365
UniProt:
Q1M5X4
LinkDB
All DBs
Position
pRL11:complement(446230..447768)
Genome browser
AA seq
512 aa
AA seq
DB search
MMNAAFQQTATDSKTGDAPAILEMRGISQIFPGVKALDNVSIALHPGTVTALIGENGAGK
STLVKILTGIYRPNEGEILVDGQPVTFASAQAAIDAGVTAIHQETVLFDELTVAENIFLG
HAPRTRLRTIDWQAMNSRAKALLTALESNIDPTIRLKDFSIAQRHLVAIARALSIEARIV
IMDEPTAALSRKEIDDLFRIVRGLKEKGKAILFISHKFDEVYEIADDFVVFRDGRAVGQG
RLKETPQDEIVRMMVGRDVENAFPKVDVAFGGPVLEIRNYSHRTEFRDISFTLRQGEILG
IYGLIGAGRSELSQSLFGITRPLSGKMMLEGREITIHSPQDAIRAGIVYVPEERGRHGLA
LPMPIFQNMTLPSLTRTSRRGFLRAAEEFALARKYAERLDLRAAALSVPVGTLSGGNQQK
VVIGKWLATAPKVIILDEPTKGIDIGSKAAVHGFISELAAEGLSIIMVSSELPEIIGMSD
RVLVMKEGLAAGIFERAELSPEALVRAATGNA
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
ttgatgaacgctgcctttcaacaaaccgccacggacagcaaaaccggtgatgcgcccgcc
attctggaaatgcgcggcatctcccagatcttcccgggcgtgaaggcgctcgacaatgtc
agcatcgcgctgcatcccggcacggtcaccgcgctgatcggcgaaaacggcgccggcaaa
tcgaccctcgtcaagatcctgaccggcatctacaggccgaacgaaggcgagatcctggtc
gatggccagccggtgacctttgccagcgcccaggccgcgatcgatgctggcgtcaccgcc
atccatcaggaaaccgtgctgttcgacgagctgacggttgccgaaaacattttcctcggc
catgcgccgcgcacgcgtctgcgcaccatcgactggcaggcgatgaatagccgcgccaag
gcgctgctgaccgcgctcgaaagcaatatcgacccgacgatccggctgaaggacttctcg
atcgcgcagcgccatctggtggcgattgcgcgcgctctgtcgatcgaggcccgcatcgtc
atcatggacgaaccgacggcagctctttcccgcaaggagatcgacgatctcttccgcatc
gtccggggcctgaaggaaaagggcaaggcgatcctcttcatcagccataagttcgacgag
gtctacgagatcgccgacgatttcgtcgtcttccgcgacggccgcgccgtcggtcagggc
cggctcaaggaaacgccgcaggacgagatcgtccgcatgatggtcggccgcgacgtcgag
aatgcctttccgaaggtcgacgttgccttcggcggcccggttctcgagatccgcaactac
agccatcgcaccgaattccgcgacatctccttcaccctgcgccagggcgagattctcggc
atttacggcctgatcggcgccgggcgttcggaactgtcccaatcgctcttcggcatcacc
aggccgctctccggcaagatgatgctcgaaggccgcgagatcaccatccattcgccgcag
gacgcgatccgcgccggcatcgtctatgtgccggaggagcgcggccgccacgggttggcg
ctgccgatgccgatcttccagaacatgacgctgccttcgcttacccgcacctcgcgccgg
ggctttctccgggcggcggaagaattcgcgcttgcccgcaaatatgccgagcggctggac
ctgcgcgccgcggccctttccgtcccggtcggcacgctgtcgggcggcaatcagcagaag
gtcgtcatcggcaaatggctggcgacggcgccgaaggtcatcatcctcgatgaacccaca
aagggcatcgacatcggctcgaaggcagccgtgcacggcttcatcagcgaactcgccgcc
gagggcctgtcgatcatcatggtctcgtccgaactgcccgaaatcatcggcatgtcggac
cgcgtcctggtgatgaaggagggtctcgccgccggaattttcgaacgcgccgagctgtcg
ccggaagcgctggtgcgcgccgccaccggcaatgcataa
DBGET
integrated database retrieval system
